Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05720 ATGTTGCTTTCTAATGGAGAAGACCAGATTCTGTTGCCTTCAGAAAATGAAACCCAGGTTTCAAAAGCTGATTCAGTTGATGGATCGTTACTGGTTTCAAAGGTTTACACTGATGTGGCTGTTGTTCCTGAGCACCAAAACAACGAGATTCAACACTTGATATCCAATTTACAAAGAGAGGTTGATGAACTGAGGCTGAAGCAGAGAGTAGTGGATGAAAAGAGGAGACAAGCATTGAGTAAGATATTGGATATTAAAGGGAGTATTAGAGTGTTTTGTAGAATTCGACCGAGTCTTTCAATAGAGAAGAGAAGAAATTATGAACCTGTATCAGCTGAATCAGAGAGAATTCGAGTTAAGTTTGGGGGGACTAGAAAAGAATTTGAGTTTGATAGGGTTTTTCATCAAGAAACAACTCAAGAAAGTGTTTTCGTTGAGGTGGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGCGTTTTCGCATATGGTCAAACCGGCACAGGCAAGACATTCACTATGGATGGTACAAATGAGAAGTCAGGGATTATTCCTCGTGCTATTGAAGAGCTCTTTCGTCAAGCATCAATGGATGCCTCGTCTTCTTTTACTTTTTCTATGAGTATGTTGGAAGTTTACATGGGCCATGTCAGGGATCTGCTGACTCCAAGACAGTCTTGTAGAGCACACGAACCTCTCACTAAGTGCAATCTCAACATCCAAACAGATCCAAAAGGATTGGTGGAAATTGAGGGTCTCTCAGAAGTGCAAATTTCCGATTGTGCTAAAGCAAGATGGTGGTACAACAAGGGAAAACGATTCAGGTCAACCTCGTGGACTAATGTAAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAACCATATTTAGACGCGGGGATTTTTCGGATGCCAAAAGCGAAACAAGTAAGTTGTGGATGGTTGATCTTGGAGGCAGCGAACGGTTGCTAAAAACCGGGGCCAGAGGACTAACACTTGACGAAGGTCGGGCTATTAATCTTTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACCCAGCTACTGAGAGATTCTCTCGGTGATGGCTCCAAGGTCTTGATGCTCGTGCACATTAGCCCTTCCGAAGAAGATGTCTGTGAGACGATTTGTTCTTTAAACTTCGCAAAGAGAGCAAGAGCAATAGAGTCCAATAAAGAAGTACCAATGGAATTGAAAAAGCAAAAGGAGAAAAAGATTATGGAGCTCGAGGAAGACATTATGGAAGCTGAAAAAGAACGTCAGAGTTTAAGGGGTCAAATTCAGAAAGTTGAGTTAAAGTTAAGCGAGAATAAAAAGCTCTTTTCAACCACATGTAGTCTTAAGGAAAGTGATAACTTAGAAAATTCTACTAGTCTCAAAGATGATTTCAAAGAGGTCACTGAAACACCTAAAGCATCTAAGAAGTCTATTCAAAGAAGCTCCAATTCAGTGCCTCGATTCATGAACTCAACTGTTGCTAGTCGGCATAGGCAAATTGCAGCTGAACAAGAAATCGGTAGTAGAACAAAAAGCTTAAGATCAATAGTCACCAGAAATTCAATCCAGTTCCCATGTTCACAATCATTAAATTATTCAGATCTTCGCATCAAAACAATACTGCGAAGTTCAACTGGAAAGTCTCGGTATACTGGAACAAATAATGTTCCAAATACTATCATTCATTCAGAAAGGCCTAAGTGCAGTGAATTGGAATCAAAAGTCATAAGTCCTCGAAGTACAACGGTTACAGCATCAGATTCAAATTTGAGAGTAACATTGTGTCGTCATAGAAGAAGGATGTCAAATCTGATATAA 1890 0.4053 MLLSNGEDQILLPSENETQVSKADSVDGSLLVSKVYTDVAVVPEHQNNEIQHLISNLQREVDELRLKQRVVDEKRRQALSKILDIKGSIRVFCRIRPSLSIEKRRNYEPVSAESERIRVKFGGTRKEFEFDRVFHQETTQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEKSGIIPRAIEELFRQASMDASSSFTFSMSMLEVYMGHVRDLLTPRQSCRAHEPLTKCNLNIQTDPKGLVEIEGLSEVQISDCAKARWWYNKGKRFRSTSWTNVNEASSRSHCLTRITIFRRGDFSDAKSETSKLWMVDLGGSERLLKTGARGLTLDEGRAINLSLSALADVLAALKRKRCHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEVPMELKKQKEKKIMELEEDIMEAEKERQSLRGQIQKVELKLSENKKLFSTTCSLKESDNLENSTSLKDDFKEVTETPKASKKSIQRSSNSVPRFMNSTVASRHRQIAAEQEIGSRTKSLRSIVTRNSIQFPCSQSLNYSDLRIKTILRSSTGKSRYTGTNNVPNTIIHSERPKCSELESKVISPRSTTVTASDSNLRVTLCRHRRRMSNLI 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05720 629 PRINTS Kinesin heavy chain signature 314 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05720 629 PRINTS Kinesin heavy chain signature 157 178 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05720 629 PRINTS Kinesin heavy chain signature 363 384 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05720 629 PRINTS Kinesin heavy chain signature 282 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05720 629 Pfam Kinesin motor domain 102 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05720 629 ProSiteProfiles Kinesin motor domain profile. 88 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05720 629 Coils Coil 424 458 - -
Vivi1g05720 629 Gene3D Kinesin motor domain 83 459 IPR036961 -
Vivi1g05720 629 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 545 IPR027640 GO:0003777|GO:0007018
Vivi1g05720 629 SMART kinesin_4 86 421 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05720 629 MobiDBLite consensus disorder prediction 486 508 - -
Vivi1g05720 629 Coils Coil 47 74 - -
Vivi1g05720 629 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 453 IPR027417 -
Vivi1g05720 629 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 40 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05720 Vivi-Chr1 125891580 125895205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05720 75 413 Calmodulin-binding Proteins AT5G65930 40.698 1.94e-70 246