Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05707 ATGGCTGGAAGTAACCAACTCAACCCTAGCGATTCAAAGATGGTGGTTCCGCTGAACATGTGGGTTTTAATCTCGAATTTCAAGTTGGCATACAATCTTCTCCGTCGTCCTGATGGAACTTTCAACCGTGACTTGGCGGAGTTTCTTGATCGGAAAGTTCCGGCGAATGCAAACCCTGTGGATGGAGTGTTCTCTTTTGATGTGATTGTTGACAGGGAAACAAATCTCCTTACTAGAATTTACCGTCCTGTTGAGGGAGATGAAAGTGTGAACATTGTTGATCTTGAGAAGCCTGTAACGGCTGAGGTTGTACCTGTTCTCATGTTCTTCCATGGTGGAAGTTTTGCACATTCTTCGGCGAATAGTGCGATATATGATACCTTGTGTCGTCGATTGGTTGGTATTTGTAATGCTGTTGTTGTGTCTGTGAATTATAGGCGTGCACCGGAGAATAGGTACCCTTGTGCTTATGAAGATGGGTGGAAAGCTCTTAGATGGGTTAGTTCTAGAACTTGGTTGCAGAGTAAAAAGGATAACAAGGTTCGGATCTACATGGTTGGTGATAGCTCGGGCGGGAACATTGTGCACCATGTTGCTTTGAAAGGTATGGACTCTGGAATTCAGGTGTTGGGGAATATACTTCTCAACCCGTTGTTTGGTGGGGAGGAAAGAACGGAATCTGAAAAGCGTCTCGATGGGAGGTACTTTGTTAGAGTGAAAGATAGAGACTGGTATTGGAGAGCTTTTCTTCCTGAAGGAGAAGACAGAGACCATCACGCGTGTAACCCTTTCGGTCCCAAGGGTCGAAGCCTTGAAGGGGTTGTCTTCCCTAAAAGCCTCGTTGTGGTTGCTGGTTTGGATCTTGTTCAGGATTGGCAATTGGGTTATGCAAAAGGGCTTGAGAAAGCTGGACAAAACGTGAAGCTGCTCTTTCTGGAGCAAGCGACTGTCGGATTTTACTTGCTTCCGAATAATGAACACTTCTCTGCATTGATGGATGAGATAAAACAATTTGTGAGCTCTGACTGTTGA 1032 0.4516 MAGSNQLNPSDSKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLTRIYRPVEGDESVNIVDLEKPVTAEVVPVLMFFHGGSFAHSSANSAIYDTLCRRLVGICNAVVVSVNYRRAPENRYPCAYEDGWKALRWVSSRTWLQSKKDNKVRIYMVGDSSGGNIVHHVALKGMDSGIQVLGNILLNPLFGGEERTESEKRLDGRYFVRVKDRDWYWRAFLPEGEDRDHHACNPFGPKGRSLEGVVFPKSLVVVAGLDLVQDWQLGYAKGLEKAGQNVKLLFLEQATVGFYLLPNNEHFSALMDEIKQFVSSDC 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05707 343 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Vivi1g05707 343 FunFam Gibberellin receptor GID1 1 341 - -
Vivi1g05707 343 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 107 123 IPR002168 GO:0016787
Vivi1g05707 343 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Vivi1g05707 343 Pfam alpha/beta hydrolase fold 107 320 IPR013094 GO:0016787
Vivi1g05707 343 SUPERFAMILY alpha/beta-Hydrolases 33 339 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05707 Vivi-Chr1 125669094 125671658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05707 1 343 Carbohydrate Esterase AT3G05120 73.913 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05707 K14493 - gmx:100815161 646.736