Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05706 ATGGAGTGCAACAAGGATGAGGCTGTGAGGGCTAAGCAAGTGGCAGAGAGTAGAATGCAAAGGGGTGAGTATGTAGAGGCGCTGAAGTTTGCTATCAAGGCGAAAAAACTGTACCCTGATGTTGAAAACATTGCACAGATCCTTGCAGTTTGTGAGGTTCACAGTGCTGCACTGAACAAGCTCTCTAGGGCTGAAATGGACTGGTATGGAATTCTGCAGACAGAGAAACTCTCCGATGAAGCCGTCATAAGAAAACAGTACAGAAAGCTTGCACTGTTACTTCATCCTGATAAAAATAAGTTTGCTGGGGCAGAAGCTGCTTTCAAGTTGATCGGGGAAGCCAATGGGGTGTTGAATGACCAAGCAAAGCGAATTTTACATGATATGAAAGTTAGAGCCCATTTACAAGAGATGAAAGTTAAAGCTCATTTGAAAACTGCAGTACCTAACACCTCATCCCATCACTCAAACGGGAATATGTTTGCTGCAAATCATGTTCCAATTCCAACGAAATATCAGAAAAATGGTTCTTCAAATGTCCCTTGTGATCCCAATCTGAGACTTCAGACTTTCTGGACGACTTGCAGTCACTGTAATTCCAAGTTCCAGTTCTACTTACATGTTAAGAATAGAGCCATAGTCTGTCAAAGTTGTAAGAAAAGCTTTATAGCGTTTTCTTTAAGTCCACAGACTACCCAATCATCTGTACCATTTCGTGTCTCGAAAGCGGTTCCAATGCAGGATACACCAAAACCAGGCTCAACAAGTAAAGATGGAAAACCCGTTGGCGATGGAAGTGCAGATACTTTTGTGCGGTCAAATACTCCAAGTATGAAAACCTGTGCTACTGGAGTTGGTAAGGAACCTAAAGATAAAAAGAGTAAGGATGGCCATGTTCCCGTGTCCAAACCAAAGGCGTCACAAGCCTCAAAGAATGTTGGAAGTAAGAGAGTGAGACAACCAGAACCAGATTCAAAAGATAGATCCAACACTAAAAATAATGAAGAAAATCAAGATGTCAATGTTCGAGAAAATGTTGCTGGTCCTTCAACATTGAATGTTAGAAGGTCCTCCAGACAAAAGCAACACGTTTCATACGTGGAAAATTATGAAGATGAAAATTGCAACGTTCCTTCCAAAAAGCACCGGCAAAATGAGTCATTTAACACAGAGGATGTTGAGGAAAAGAACATGTCTGAAGAAATTTTAAGGAATACAAGCAAAGATGAGCGTTCTGATGTTCAAGGAGACAAGGTATTGGAGTCAGATATCCCTTCTAGTCCAGAGATAATTATTTGTCCCGAAACAGATTTCAATGATTTTGACAAAGATAAGGCTGAGAATTGTTTTGCTGTTAATCAATTATGGGCAATTTATGATACCACTGATGCTATGCCAAGATTTTATGCTTTTGTCAAGAAAGTAGCCTCCCCTTTCAAATTGCAGATTACATGGTTGGAAGCTAACCCAGACGAGGATGATGATGTTGAATGGTACAATGCAGATTTGCCTATTGCTTGTGGTAAATTCAAACTTGCTAACTCTCAGAAAACTTCAGACATTGGTATGTTCTCTCATCAGATTAAGTATATAAAAGGAAAAAAGAAAAACTCTTACCTAGTATTTCCCAACAAGGGAGAAACTTGGGCGATTTTCAGCAACTGGGATATTGAATGGAATTCTAATCCAGAAAATTTTCTGAAACGCGAATTTGCTTATGTTGAAATCATATCAGATTTTTCTGAAAATGTTGGCATTGAAGTAGCTTGCCTAGGCAAAGTGGAAGGCTTTAAAAGTCTCTTTGAGAGAACAGGAAAGAATGGAGAGAACACATTTTGTATTCTACCAAAGGAGCTATATAGATTCTCACATCAAGTTCCTTCATATAAGATGACAGGTGATGAAAGGGAAGGTGTTCCAAAAGGATGTTTTGAACTTGATCCTGCAGCTCTGCCAGCTAACATCTTTGAAGCTGCTGAAGTATAG 1986 0.3968 MECNKDEAVRAKQVAESRMQRGEYVEALKFAIKAKKLYPDVENIAQILAVCEVHSAALNKLSRAEMDWYGILQTEKLSDEAVIRKQYRKLALLLHPDKNKFAGAEAAFKLIGEANGVLNDQAKRILHDMKVRAHLQEMKVKAHLKTAVPNTSSHHSNGNMFAANHVPIPTKYQKNGSSNVPCDPNLRLQTFWTTCSHCNSKFQFYLHVKNRAIVCQSCKKSFIAFSLSPQTTQSSVPFRVSKAVPMQDTPKPGSTSKDGKPVGDGSADTFVRSNTPSMKTCATGVGKEPKDKKSKDGHVPVSKPKASQASKNVGSKRVRQPEPDSKDRSNTKNNEENQDVNVRENVAGPSTLNVRRSSRQKQHVSYVENYEDENCNVPSKKHRQNESFNTEDVEEKNMSEEILRNTSKDERSDVQGDKVLESDIPSSPEIIICPETDFNDFDKDKAENCFAVNQLWAIYDTTDAMPRFYAFVKKVASPFKLQITWLEANPDEDDDVEWYNADLPIACGKFKLANSQKTSDIGMFSHQIKYIKGKKKNSYLVFPNKGETWAIFSNWDIEWNSNPENFLKREFAYVEIISDFSENVGIEVACLGKVEGFKSLFERTGKNGENTFCILPKELYRFSHQVPSYKMTGDEREGVPKGCFELDPAALPANIFEAAEV 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05706 661 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 660 - -
Vivi1g05706 661 Pfam DnaJ domain 67 127 IPR001623 -
Vivi1g05706 661 SMART dnaj_3 66 123 IPR001623 -
Vivi1g05706 661 MobiDBLite consensus disorder prediction 317 339 - -
Vivi1g05706 661 CDD DnaJ 67 120 IPR001623 -
Vivi1g05706 661 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Vivi1g05706 661 PRINTS DnaJ domain signature 69 87 IPR001623 -
Vivi1g05706 661 PRINTS DnaJ domain signature 87 102 IPR001623 -
Vivi1g05706 661 PRINTS DnaJ domain signature 103 123 IPR001623 -
Vivi1g05706 661 Gene3D DnaJ domain 53 153 IPR036869 -
Vivi1g05706 661 SUPERFAMILY Chaperone J-domain 59 134 IPR036869 -
Vivi1g05706 661 MobiDBLite consensus disorder prediction 340 360 - -
Vivi1g05706 661 MobiDBLite consensus disorder prediction 285 300 - -
Vivi1g05706 661 Pfam Domain of unknown function (DUF3444) 429 635 IPR024593 -
Vivi1g05706 661 MobiDBLite consensus disorder prediction 375 399 - -
Vivi1g05706 661 MobiDBLite consensus disorder prediction 234 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05706 Vivi-Chr1 125658912 125661681 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05706 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.760 1.51e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05706 - - mtr:25483848 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05706 1 125658912 125661681 Vivi1g05706 1 125658912 125661681 ECH
Vivi1g05706 1 125658912 125661681 Vivi4g03449 4 151552416 151556808 PCT
Vivi6g05024 6 154341670 154347562 Vivi1g05706 1 125658912 125661681 PCT