Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05699 ATGGCTATTGAACTTGCTCTTATTGCTTCAAAGTTACAAAATTTATCTACTTCTGATCATGCCTCCGTGGTTTCCATGAACTTGTTTGTGGCACTTTTATGTGCTTGTATTGTTCTTGGCCATCTTCTCGAGGAGAATCGGTGGATGAATGAATCCATCACTGCCCTTTTGATTGGTATTTGCACTGGTGTATTCATTTTGCTGCTAAGTGGTGGAAAAAGCTCGCATATTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCGCCTATAATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTCTTCGTCAACTTCATGACTATCACGTCGTTTGGTGCTATTGGTACACTAATATCCTGCTGCGTCATAACTTTGGGTGCTACCCAAGCTTTTAAGAGGATGGATATTGGGCCACTGGAATTGGGCGATTACCTAGCAATTGGAGCAATATTTGCCGCGACAGATTCTGTTTGCACATTGCAGGTGCTAAATCAAGACGAGACACCTTTGTTGTATAGTCTTGTATTTGGGGAAGGTGTTGTGAATGATGCTACCTCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGATCTCAACCAACTCAATCCTTCAATTGCATTGCACTTCTTGGGCAACTTCTTCTATTTGTTTATAGCAAGCACTCTCCTCGGCGTTTTGACAGGTCTGCTCAGTGCTTACGTTATTAAAAAGCTCTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTTATGGCATACCTCTCCTATATGCTGGCTGAGTTATTCTATCTGAGTGGCATTCTCACCGTATTCTTTTGCGGTATTGTCATGTCTCATTATACTTGGCATAATGTGACTGAGAGCTCAAGAGTCACTACCAAGCATTCTTTTGCTACCTTGTCATTTGTTGCCGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCCTGGACATTGAAAAATGGAAGTTTGTTAGTGATAGTCCTGGAACATCTATAGCAACAAGTTCAGTATTGTTGGGTTTAATACTCCTTGGAAGAGCAGCGTTTGTTTTCCCCTTATCCTACTTATCCAACTTGACTAAAAAATCACAATATCAGAAGATCTCCTTCAGACAACAAGTGATCATTTGGTGGGCCGGTCTTATGAGAGGCGCTGTTTCAATGGCGCTCGCGTACAATCAGTTTACAATGTCGGGGCACACTCAACTGCGCAGCAATGCAATCATGATCACCAGCACCATCACAGTTGTCCTTTTCAGCACAGTGGTATTCGGTTTGCTGACCAAGCCACTCATAAGGCTTCTACTACCTCATTCTAAAGTCACAACCAGCATGACAACCACAGAAACATCTACTCCAAAATCATTCATTGTCCCACTTCTAGGAAACGCCCGAGACTCTGAAGCTGATCTTGAAGGCCATGAAATTCACCGTCCAAACAGCCTCCGCGCCTTACTAGCCACTCCAACTCACACTGTTCATCGACTATGGCGAAAGTTTGATGATTCATTCATGCGTCCCGTTTTCGGTGGCAGGGGTTTTGTTCCCGTAGAACCCGGCTCACCTAGCGAACGCAATGGTAATAGTCATTGGTAA 1626 0.4317 MAIELALIASKLQNLSTSDHASVVSMNLFVALLCACIVLGHLLEENRWMNESITALLIGICTGVFILLLSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTITSFGAIGTLISCCVITLGATQAFKRMDIGPLELGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNQLNPSIALHFLGNFFYLFIASTLLGVLTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSIATSSVLLGLILLGRAAFVFPLSYLSNLTKKSQYQKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHSKVTTSMTTTETSTPKSFIVPLLGNARDSEADLEGHEIHRPNSLRALLATPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPSERNGNSHW 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05699 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi1g05699 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi1g05699 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi1g05699 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi1g05699 541 Gene3D - 146 197 - -
Vivi1g05699 541 NCBIfam sodium/hydrogen exchanger 3 25 448 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Vivi1g05699 541 PANTHER SODIUM/HYDROGEN EXCHANGER 16 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Vivi1g05699 541 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05699 Vivi-Chr1 125556379 125560773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05699 6 539 Antiporters AT3G05030 77.881 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05699 - - gmx:732573 917.916