Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05690 ATGTTACTTTCTAATGGAGAAGACCAGATTCTGTTGCCTTCGGAAAATGAAACCCAGGTTTCAAAAGCTGATTCAGCTGATGGATCGTTACTGGTTTCAAAGGTTTACACTGATGTGGCTGTTGTTCCCGAGCACCAAAACAACGAGATTCAACACTTGATATCCAATTTACAAAGAGAGGTTGATGAACTGAGGCTGAAGCAGAGAATAGTGGATGAAAAGAGGAGACAAGCATTGAGTAAGATATTGGATATCAAAGGGAGCATTCGAGTGTTTTGTAGAATTCGACCGACGATAGAGAAGAGAAGAAATTATGAACCTGTATCGGCTGAATCAGAGAGAATTCGAGTTAAGTTTGGAGGGATAAGGAAAGAATTTGAGTTTGATAGGGTTTTTCATCAAGACACAACTCAAGAAAGTGTTTTTGTTGAGGTGGAGCCAATTCTAAGATCTGCAATGGACGGGCACAATGTGTGCGTTTTCGCTTATGGTCAAACCGGCACAGGCAAGACATTCACTATGGATGGTACTAATGAGCAGTCAGGGATTATTCCTCGTGCTATTGAAGAGCTCTTTCGTCAAGCATCAATGGATGCCTCGTCTTCTTTTACTTTTTCAATGAGTATGTTGGAAGTTTACATGGGCCATGTCAGGGATCTGCTGACTCCAAGGCAGTCTTGTAGAACACATGAACCTCTCACTAAGTGCAATCTCAACATCCAAACAGATCCAAAAGGATTGGTGGAAATTGAGGGTCTCTCAGAAGTGCAAATTTCCGATTGTGCTAAAGCAAGATGGTGGTACAACAAGGGAAAACGATTCAGGTCAACCTCGTGGACTAATGTAAATGAGGCATCAAGCAGGTCACACTGCTTGACAAGGATAACCATATTTAGACGCGGGGATTCTTCTGATGCCAAAAGCGAAACAAGTAAGTTGTGGATGGTTGATCTTGGAGGCAGCGAACGGTTGCTAAAAACCGGGGCCAGAGGACTAACACTTGACGAAGGTCGGGCTATTAATCTTTCTCTTTCAGCTCTAGCTGATGTCCTTGCAGCTTTGAAGAGAAAGAGGTGTCATGTGCCTTACAGAAATAGCAAGCTGACCCAGCTACTGAGAGATTCTCTCGGTGATGGCTCCAAGGTCTTGATGCTCGTGCACATTAGCCCTTCCGAAGAAGATGTTTGCGAGACGATTTGTTCTTTAAACTTTGCAAAGAGAGCAAGAGCAATAGAGTCCAATAAAGAAGTACCTATGGAATTGAAAAAGCAAAAGGAGAGAAAGATTATGGAGCTCGAGGAAGACATTATGGAAGCTGAAAAAGAACGTCAGAGTTTAAGGGATCAAATACAGAAAGTTGAGTTAAAGTTAAGCGAGAATAAAAAGCTCTTTTCAACCACATGTAGTCTTAAGGAAAGTGATAACTTAGAAAATTCTACTAGTCTCAAAGATGATTTCAAAGAGGTCACTGAAACACCTAAAGCATCTAAGAAATCTATTCAAAGAAGCTCTAATTCAGTGCCTCGATTCATGAACTCAACTGTTGCTAGTCGACATAGGCAAATTGCAGCTGAACAAGAAATCGGTAGCAGAACAAAAAGTTTAAGATCAATAGTCACCAAAAGTTCAATCCAGTTCCCATGTTCACAATCATTAAATTATTCAGATCTTCGCATCAAAACAATACTGCGAAGTTCAACTGGAAAGTCTCGGTATACTGGAACAAATAATGTTCCAAATATTATCATTCATTCAGAAAGGCCTAAGTGCAGTGAATTGGAATCAAAAGTCATAAGTCCTCGAAGTACAACGGTTACAGCATCAGATTCAAATTTGAGAGTAACATTGTGTCGTCATAGAAGAAGGATGTCAAATCTGATATAA 1884 0.4055 MLLSNGEDQILLPSENETQVSKADSADGSLLVSKVYTDVAVVPEHQNNEIQHLISNLQREVDELRLKQRIVDEKRRQALSKILDIKGSIRVFCRIRPTIEKRRNYEPVSAESERIRVKFGGIRKEFEFDRVFHQDTTQESVFVEVEPILRSAMDGHNVCVFAYGQTGTGKTFTMDGTNEQSGIIPRAIEELFRQASMDASSSFTFSMSMLEVYMGHVRDLLTPRQSCRTHEPLTKCNLNIQTDPKGLVEIEGLSEVQISDCAKARWWYNKGKRFRSTSWTNVNEASSRSHCLTRITIFRRGDSSDAKSETSKLWMVDLGGSERLLKTGARGLTLDEGRAINLSLSALADVLAALKRKRCHVPYRNSKLTQLLRDSLGDGSKVLMLVHISPSEEDVCETICSLNFAKRARAIESNKEVPMELKKQKERKIMELEEDIMEAEKERQSLRDQIQKVELKLSENKKLFSTTCSLKESDNLENSTSLKDDFKEVTETPKASKKSIQRSSNSVPRFMNSTVASRHRQIAAEQEIGSRTKSLRSIVTKSSIQFPCSQSLNYSDLRIKTILRSSTGKSRYTGTNNVPNIIIHSERPKCSELESKVISPRSTTVTASDSNLRVTLCRHRRRMSNLI 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05690 627 PRINTS Kinesin heavy chain signature 312 330 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05690 627 PRINTS Kinesin heavy chain signature 361 382 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05690 627 PRINTS Kinesin heavy chain signature 280 297 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05690 627 PRINTS Kinesin heavy chain signature 155 176 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05690 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 452 IPR027417 -
Vivi1g05690 627 Gene3D Kinesin motor domain 83 457 IPR036961 -
Vivi1g05690 627 ProSiteProfiles Kinesin motor domain profile. 88 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05690 627 Coils Coil 422 463 - -
Vivi1g05690 627 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 40 413 - -
Vivi1g05690 627 Coils Coil 47 74 - -
Vivi1g05690 627 PANTHER KINESIN-LIKE PROTEIN KLP-3 45 541 IPR027640 GO:0003777|GO:0007018
Vivi1g05690 627 SMART kinesin_4 86 419 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05690 627 Pfam Kinesin motor domain 114 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05690 Vivi-Chr1 125375923 125379725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05690 75 411 Calmodulin-binding Proteins AT5G65930 40.563 1.68e-70 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05690 - - gmx:100785581 920.613