Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05669 ATGGAAGTTAATAATACAACTACTATTGTACCTTCAGGGCCACCTATTGTTTCTACAAAGAACCATACTTTCATACACCATTTCCATCACTTACATTCAGATAAAAATTACCATAGCCATGCTCGCCATTTTCCCTTCAAAACCGTTCTCTTAATTGTCACATTGGTTGCCTTAATTATGCTCTTCTTTACCATTTTCATGGTTGTTTGCTTGATCCGTCGCCAAAAATCTTCAAGCAAAAATGGGATTTACAAAGAGGATTGTGAGAGTAGAGTGCTTCATGATACAAGCAGCAGACACATAGCTTCAACAATCTTGTCCTTTGATTCTAGCCCAGATGTTAAAGGTGGGTGTCTTTATGGGGGAAATCTGAGCAGGACACCAACAACACCTAAATTTAAAGGAGTGCAAGTTTTCACGTATAGAGAGCTAGAAGCTGCTACAGGTGGATTCAATGAAGCAAATGTGATTGGTAATGGAGTAAATGGTTTGATGTATAAAGGAGTCTTAACTGATGGAACTTTGGCAGCAATTAAGTTGCTGCACATTGAGGGTAAGCAAGCAGAGCGTGGCTTCAAAATAGAGGTCGATCTTCTAAGCCAATTGCATTCTCCTTATTTGGTGGAGTTGCTTGGCTATTGTGCAGACCAACACCACAGGTTATTGATTTTTGAATACATGCCAAATGGTACACTCCAAAACCATCTTCACTCAACCAATGATAAAACTCAGCCATTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCTAGGGCCTTGGAGTTCTTGCATGAATATGCTGTATCACCCGTGATCCATAGAGACTTCAAGACTTACAATGTTTTACTGGATCAAAACTTTCGTGCAAAGGTGGCAGATTTTGGATTGGCTAAGATAGGATCAGAAAAGAGAAATGGCCAGGTTTCTACCCGTGTGTTGGGGACCACAGGATATTTGGCACCAGAGTACGCCTCCACAGGTAAGCTTACTACAAAGTCAGATGTTTACAGCTACGGGGTAGTTCTTCTCGAATTGCTGACAGGACGTGTACCGGTTGATATTAAGCGCCCCACTGGAGAACATGTTCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAAGTTGTGGAAATGGTTGACCCAGTTCTACACGGGCAATACTCAAAGAAGGCATTAGTTCAGGTAGCTGCAATCGCAGCAATGTGCATACAACCAGAAGCTGATTACAGGCCACTAATGACCGATGTGGTACAATCATTGATACCACTTGTGAGGACACAATCTCTTTCCAGTTCACTAAGATTTCATAAACAAATACCAATTTATTAA 1341 0.4169 MEVNNTTTIVPSGPPIVSTKNHTFIHHFHHLHSDKNYHSHARHFPFKTVLLIVTLVALIMLFFTIFMVVCLIRRQKSSSKNGIYKEDCESRVLHDTSSRHIASTILSFDSSPDVKGGCLYGGNLSRTPTTPKFKGVQVFTYRELEAATGGFNEANVIGNGVNGLMYKGVLTDGTLAAIKLLHIEGKQAERGFKIEVDLLSQLHSPYLVELLGYCADQHHRLLIFEYMPNGTLQNHLHSTNDKTQPLDWWARMRIALDCARALEFLHEYAVSPVIHRDFKTYNVLLDQNFRAKVADFGLAKIGSEKRNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPTGEHVLVSWALPRLTNREKVVEMVDPVLHGQYSKKALVQVAAIAAMCIQPEADYRPLMTDVVQSLIPLVRTQSLSSSLRFHKQIPIY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05669 446 PANTHER OS07G0668900 PROTEIN 130 432 - -
Vivi1g05669 446 CDD STKc_IRAK 157 427 - -
Vivi1g05669 446 FunFam Receptor-like serine/threonine-protein kinase ALE2 227 441 - -
Vivi1g05669 446 SUPERFAMILY Protein kinase-like (PK-like) 128 424 IPR011009 -
Vivi1g05669 446 Gene3D Transferase(Phosphotransferase) domain 1 227 441 - -
Vivi1g05669 446 Pfam Protein tyrosine and serine/threonine kinase 155 424 IPR001245 GO:0004672|GO:0006468
Vivi1g05669 446 Gene3D Phosphorylase Kinase; domain 1 124 226 - -
Vivi1g05669 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Vivi1g05669 446 ProSiteProfiles Protein kinase domain profile. 151 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05669 Vivi-Chr1 124730257 124733746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05669 31 437 Receptor kinase-like Gene Family AT3G58690 53.753 4.62e-148 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi1g05669 PK_Tyr_Ser-Thr 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05669 - - gmx:100499645 644.039