Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05585 ATGGGAGGTAAAAATGGATTGTGGAAATATGGTGGGAATCCCAAACCACGTAGCTTTGAGAAACCAGTTGTGAGGAAACGCTCAGAACCATTTACGAGGTCTTTGTCAAGAGCTAAGTCAACAGGCGACAAGGATAGTTCGCCGGGTGACCACTCTTCAAATATTGATGCTGTACTGCCTGATCCCAGTGAAGGGAGTTCTGTTCCTTCCGTGTATTCACTAATTCGTGACATTTTGCATGATAAGAAGCAAGAAGAAATTCCAATTATAATGGAATCTCTGCTTAGCAAAGTCATGGAGGAGTTTGAAAGTCGCGTGCTCATCATACAACAACAAACATCTATAACACCCCGAGAAGATAAGGCACCATCTAAAGCATTGAATTCAAATTTAAAAGCTATTGATGGTGATGAAGAGATGGAAGAAAATGATGATGTAGATGGTGTGAAGCACAATGGCAGTGAAGAATCAAGTAGCCAGCTTTTGAAACATCAAAACTGCCAAAACATAATTCAAAGGCAAAATGAAAACATCCAGGAATTGAAAATGATTGTTCATCAAACAAAAGAAGGAATGCACTGTCTACATAAAAAATACAGGGAGGATTTCGTCGATCTAGCTAAGCATCTGAATAGCTTAGCTTCTTCTGCTTCTGGATATCAGAAAGTTCTAGAAGAAAACCGCAAGTTATACAATCAGATGCAGGACTTGAAAGGAAATATTAGAGTGTACTGTAGAGTTCGCCCCTTAAAAGGGCAACCAAACAATCGTGGCATTGTTGGTAATGTAGAAGAAGAAAGTATTTCACTCATAATGCCTTCTAAGAATGGAAAAGAGGCGAAGAAGATATTTACTTTTAACAAAGTATTTGGTCCTTCTGCAACTCAAGTGGAGGTTTTCTCAGATATACAACCTCTGATTCGTTCAGTTTTGGATGGATTCAATGTTTGTATATTTGCCTATGGCCAGACAGGCTCAGGAAAAACACACACCATGTCTGGACCAGACAATATTACCGAGGACAGAGTTGGTGTCAACTACCGCGCTTTGAGGGATCTTTTCAATCTTTCAGAACAACGGAAAGACACAATTCACTATGATATCTCTGTCCAAATGCTTGAGATATACAATGAGCAAGTGAGAGACCTGCTAATGATTGATGCTTCTAATAAAAGATTAGAAATTCGCAACAGCTCCCATAATGGTATTAATGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACAGCCGATGTCTTAAATTTGATGAACTTGGGGCAAAGGAATCGGGCAGTTAGTGCTACTGCGATGAACAATCAAAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTACGTCAGGAAATAGTCTACGTGGATGTATCCACCTAGTTGATTTGGCTGGAAGTGAGAGGGTTGATAAATCTGAGGTCATAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCGCTTTCCGCTTTAGGAGATGTAATTGCTTCCCTTGCCCAAAAGCAACCACACGTTCCTTACCGAAACAGTAAACTTACTCAGTTGCTTCAGGACTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATATTAGCCCGGAGCCTGAAGCTCTTGGAGAAACTATTAGTACACTTAAGTTTGCTGAAAGGGTCTCCACTGTTGAACTTGGTGCCGCAAGGGTTAATAAAAGTAGCAGCGAAGTGAAAGAGCTGAAGGAACAGATTGCTAGTCTACAGGCCACATTAGCAAGGATGAAGGATGGAGAGTTGGATAACTTTAAACATCCTGCAAATAGCATCACTGACATGACAAGGTCAACATCTCAATTGTCTTTCCTTGCCCCAACTAGTTGGACTTCCGGAGCTCGTAAGTTACCAAGAGATGATTCTAATAGCATCGAGGACCCTAAAAAGGCTGCATCCAAGCTGAAAATACAAAGCCTTGATCCTGAAGACATATATATGAATTTACCTACATGGCCACATCCACATGCTGGGGTAAATGGAAACGAGGATGACAGAGAATCAGTTTCTTGTAGAAGTATGAATAGGGATAAGAGCTTTACAACTGATGATAGCCTCACTGGACAGTCGGAAATAGAAAGCAAACATTCTCCATTGTTAAGTCCCTCATATCTTTCAGACCCTTCAAAAATATGTATGGAGGTGGCCACCACACCCACAAATGACTATGATGAGCTTGAGTTAGCAACTAGTGAATGTTCAGAATCAGACATGAGTTGGCAATCTCATTCATCCAAAACAACCGCCATCTCCAATGCTTTAGTGTCTAGACCAAAGAAATCAGTTCATCTCAAACAAGCAAAGAACTTCGAAACCAGGAGTATGCTCCCGTCGTTGACTCCTTCATCGCCAAGGAAACAACCTATATTAGTTAGTCAACCAAGAAAGCATTCAGGTTCAGTTTCTGCTAAAAGAAGAAATGGAAATGCCAAGTGA 2493 0.4095 MGGKNGLWKYGGNPKPRSFEKPVVRKRSEPFTRSLSRAKSTGDKDSSPGDHSSNIDAVLPDPSEGSSVPSVYSLIRDILHDKKQEEIPIIMESLLSKVMEEFESRVLIIQQQTSITPREDKAPSKALNSNLKAIDGDEEMEENDDVDGVKHNGSEESSSQLLKHQNCQNIIQRQNENIQELKMIVHQTKEGMHCLHKKYREDFVDLAKHLNSLASSASGYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLKGQPNNRGIVGNVEEESISLIMPSKNGKEAKKIFTFNKVFGPSATQVEVFSDIQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPDNITEDRVGVNYRALRDLFNLSEQRKDTIHYDISVQMLEIYNEQVRDLLMIDASNKRLEIRNSSHNGINVPDANLVPVSSTADVLNLMNLGQRNRAVSATAMNNQSSRSHSCLTVHVQGRELTSGNSLRGCIHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVIASLAQKQPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETISTLKFAERVSTVELGAARVNKSSSEVKELKEQIASLQATLARMKDGELDNFKHPANSITDMTRSTSQLSFLAPTSWTSGARKLPRDDSNSIEDPKKAASKLKIQSLDPEDIYMNLPTWPHPHAGVNGNEDDRESVSCRSMNRDKSFTTDDSLTGQSEIESKHSPLLSPSYLSDPSKICMEVATTPTNDYDELELATSECSESDMSWQSHSSKTTAISNALVSRPKKSVHLKQAKNFETRSMLPSLTPSSPRKQPILVSQPRKHSGSVSAKRRNGNAK 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05585 830 MobiDBLite consensus disorder prediction 632 722 - -
Vivi1g05585 830 FunFam Kinesin-like protein KIN-14I isoform A 235 608 - -
Vivi1g05585 830 Pfam Kinesin motor domain 246 564 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05585 830 Coils Coil 572 599 - -
Vivi1g05585 830 MobiDBLite consensus disorder prediction 638 656 - -
Vivi1g05585 830 MobiDBLite consensus disorder prediction 771 830 - -
Vivi1g05585 830 SMART kinesin_4 238 573 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05585 830 PANTHER KINESIN-LIKE PROTEIN KLP-3 29 777 IPR027640 GO:0003777|GO:0007018
Vivi1g05585 830 MobiDBLite consensus disorder prediction 790 830 - -
Vivi1g05585 830 Coils Coil 164 184 - -
Vivi1g05585 830 Coils Coil 220 240 - -
Vivi1g05585 830 ProSiteProfiles Kinesin motor domain profile. 240 565 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05585 830 MobiDBLite consensus disorder prediction 19 50 - -
Vivi1g05585 830 MobiDBLite consensus disorder prediction 133 163 - -
Vivi1g05585 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 597 IPR027417 -
Vivi1g05585 830 PRINTS Kinesin heavy chain signature 515 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05585 830 PRINTS Kinesin heavy chain signature 466 484 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05585 830 PRINTS Kinesin heavy chain signature 435 452 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05585 830 PRINTS Kinesin heavy chain signature 313 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05585 830 MobiDBLite consensus disorder prediction 678 698 - -
Vivi1g05585 830 CDD KISc_C_terminal 238 567 - -
Vivi1g05585 830 Gene3D Kinesin motor domain 235 605 IPR036961 -
Vivi1g05585 830 MobiDBLite consensus disorder prediction 699 722 - -
Vivi1g05585 830 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05585 Vivi-Chr1 122654012 122659573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05585 228 587 Calmodulin-binding Proteins AT5G65930 41.484 2.25e-78 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05585 K10406 - gmx:100808197 1031.17