Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05584 ATGGCGACAGAGCCAGAGCCAGAGCCAGCTTTGCCATTCTCACTCGTATCCGTTGTTGAAGACGTTATTCAAAAACATGGAAGTAGTTTAAGCGATATCAATTTGGCTACAAGAAAAGCTCAAGAAGCTTCTTCAAGAAGAAATGAAGCAGCGCGGTGGCTGCGAAATACAGTTGGAAATGTTGGTGGAAAAGACATGGTGGATGAACCTTCTGAACAAGATTTCAGAATTGCATTGCGAAGTGGCATTATCCTTTGCAATGCTCTCAACAAAATTCAACCTGGAGCTGTTCCCAAGGTAGTTGAAGCCCCAAGTGACATTGATAACATTCCTGATGGGGCAGCGCTGTCTGTTTATCAATACTTTGAAAATGTGAGGAATTTTCTAGTAACTGTGGAGGAGATGGGGCTTCCAACTTTTGAAGCTTCTGATTTGGAGGAGGGAGGGCAATGTTCGAGGATAGTGAATTGTGTTTTAGCACTTCAATCGTATAGTGAATGGAAAATGGGAGGTAAAAATGGATTGTGGAAATATGGTGGGAATCCCAAACCACGTAGCTTTGAGAAACCAGTTGTGAGGAAACGCTCAGAACCATTTACGAGGTCTTTGTCAAGAGCTAAGTCAACAGGCGACAAGGATAGTTCGCCGGGTGACCACTCTTCAAATATTGATGCTGTACTGCCTGATCCCAGTGAAGGGAGTTCTGTTCCTTCCGTGTATTCACTAATTCGTGACATTTTGCATGATAAGAAGCAAGAAGAAATTCCAATTATAATGGAATCTCTGCTTAGCAAAGTCATGGAGGAGTTTGAAAGTCGCGTGCTCATCATACAACAACAAACATCTATAACACCCCGAGAAGATAAGGCACCATCTAAAGCATTGAATTCAAATTTAAAAGCTATTGATGGTGATGAAGAGATGGAAGAAAATGATGATGTAGATGGTGTGAAGCACAATGGCAGTGAAGAATCAAGTAGCCAGCTTTTGAAACATCAAAACTGCCAAAACATAATTCAAAGGCAAAATGAAAACATCCAGGAATTGAAAATGATTGTTCATCAAACAAAAGAAGGAATGCACTGTCTACATAAAAAATACAGGGAGGATTTCGTCGATCTAGCTAAGCATCTGAATAGCTTAGCTTCTTCTGCTTCTGGATATCAGAAAGTTCTAGAAGAAAACCGCAAGTTATACAATCAGATGCAGGACTTGAAAGGAAATATTAGAGTGTACTGTAGAGTTCGCCCCTTAAAAGGGCAACCAAACAATCGTGGCATTGTTGGTAATGTAGAAGAAGAAAGTATTTCACTCATAATGCCTTCTAAGAATGGAAAAGAGGCGAAGAAGATATTTACTTTTAACAAAGTATTTGGTCCTTCTGCAACTCAAGTGGAGGTTTTCTCAGATATACAACCTCTGATTCGTTCAGTTTTGGATGGATTCAATGTTTGTATATTTGCCTATGGCCAGACAGGCTCAGGAAAAACACACACCATGTCTGGACCAGACAATATTACCGAGGACAGAGTTGGTGTCAACTACCGCGCTTTGAGGGATCTTTTCAATCTTTCAGAACAACGGAAAGACACAATTCACTATGATATCTCTGTCCAAATGCTTGAGATATACAATGAGCAAGTGAGAGACCTGCTAATGATTGATGCTTCTAATAAAAGATTAGAAATTCGCAACAGCTCCCATAATGGTATTAATGTGCCAGATGCAAACCTTGTTCCTGTTTCATCCACAGCCGATGTCTTAAATTTGATGAACTTGGGGCAAAGGAATCGGGCAGTTAGTGCTACTGCGATGAACAATCAAAGTAGTCGTTCTCATAGCTGCTTGACAGTTCATGTTCAAGGAAGAGAGCTTACGTCAGGAAATAGTCTACGTGGATGTATCCACCTAGTTGATTTGGCTGGAAGTGAGAGGGTTGATAAATCTGAGGTCATAGGAGATAGGCTAAAGGAGGCTCAACATATTAACAAGTCGCTTTCCGCTTTAGGAGATGTAATTGCTTCCCTTGCCCAAAAGCAACCACACGTTCCTTACCGAAACAGTAAACTTACTCAGTTGCTTCAGGACTCTCTTGGAGGCCAAGCAAAGACACTCATGTTTGTTCATATTAGCCCGGAGCCTGAAGCTCTTGGAGAAACTATTAGTACACTTAAGTTTGCTGAAAGGGTCTCCACTGTTGAACTTGGTGCCGCAAGGGTTAATAAAAGTAGCAGCGAAGTGAAAGAGCTGAAGGAACAGATTGCTAGTCTACAGGCCACATTAGCAAGGATGAAGGATGGAGAGTTGGATAACTTTAAACATCCTGCAAATAGCATCACTGACATGACAAGGTCAACATCTCAATTGTCTTTCCTTGCCCCAACTAGTTGGACTTCCGGAGCTCGTAAGTTACCAAGAGATGATTCTAATAGCATCGAGGACCCTAAAAAGGCTGCATCCAAGCTGAAAATACAAAGCCTTGATCCTGAAGACATATATATGAATTTACCTACATGGCCACATCCACATGCTGGGGTAAATGGAAACGAGGATGACAGAGAATCAGTTTCTTGTAGAAGTATGAATAGGGATAAGAGCTTTACAACTGATGATAGCCTCACTGGACAGTCGGAAATAGAAAGCAAACATTCTCCATTGTTAAGTCCCTCATATCTTTCAGACCCTTCAAAAATATGTATGGAGGTGGCCACCACACCCACAAATGACTATGATGAGCTTGAGTTAGCAACTAGTGAATGTTCAGAATCAGACATGAGTTGGCAATCTCATTCATCCAAAACAACCGCCATCTCCAATGCTTTAGTGTCTAGACCAAAGAAATCAGTTCATCTCAAACAAGCAAAGAACTTCGAAACCAGGAGTATGCTCCCGTCGTTGACTCCTTCATCGCCAAGGAAACAACCTATATTAGTTAGTCAACCAAGAAAGCATTCAGGTTCAGTTTCTGCTAAAAGAAGAAATGGAAATGCCAAGTGA 2997 0.4127 MATEPEPEPALPFSLVSVVEDVIQKHGSSLSDINLATRKAQEASSRRNEAARWLRNTVGNVGGKDMVDEPSEQDFRIALRSGIILCNALNKIQPGAVPKVVEAPSDIDNIPDGAALSVYQYFENVRNFLVTVEEMGLPTFEASDLEEGGQCSRIVNCVLALQSYSEWKMGGKNGLWKYGGNPKPRSFEKPVVRKRSEPFTRSLSRAKSTGDKDSSPGDHSSNIDAVLPDPSEGSSVPSVYSLIRDILHDKKQEEIPIIMESLLSKVMEEFESRVLIIQQQTSITPREDKAPSKALNSNLKAIDGDEEMEENDDVDGVKHNGSEESSSQLLKHQNCQNIIQRQNENIQELKMIVHQTKEGMHCLHKKYREDFVDLAKHLNSLASSASGYQKVLEENRKLYNQMQDLKGNIRVYCRVRPLKGQPNNRGIVGNVEEESISLIMPSKNGKEAKKIFTFNKVFGPSATQVEVFSDIQPLIRSVLDGFNVCIFAYGQTGSGKTHTMSGPDNITEDRVGVNYRALRDLFNLSEQRKDTIHYDISVQMLEIYNEQVRDLLMIDASNKRLEIRNSSHNGINVPDANLVPVSSTADVLNLMNLGQRNRAVSATAMNNQSSRSHSCLTVHVQGRELTSGNSLRGCIHLVDLAGSERVDKSEVIGDRLKEAQHINKSLSALGDVIASLAQKQPHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETISTLKFAERVSTVELGAARVNKSSSEVKELKEQIASLQATLARMKDGELDNFKHPANSITDMTRSTSQLSFLAPTSWTSGARKLPRDDSNSIEDPKKAASKLKIQSLDPEDIYMNLPTWPHPHAGVNGNEDDRESVSCRSMNRDKSFTTDDSLTGQSEIESKHSPLLSPSYLSDPSKICMEVATTPTNDYDELELATSECSESDMSWQSHSSKTTAISNALVSRPKKSVHLKQAKNFETRSMLPSLTPSSPRKQPILVSQPRKHSGSVSAKRRNGNAK 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05584 998 Pfam Calponin homology (CH) domain 45 165 IPR001715 GO:0005515
Vivi1g05584 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 408 765 IPR027417 -
Vivi1g05584 998 Pfam Kinesin motor domain 414 732 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05584 998 CDD CH_AtKIN14-like 46 163 - -
Vivi1g05584 998 FunFam Kinesin-like protein KIN-14I isoform A 403 776 - -
Vivi1g05584 998 MobiDBLite consensus disorder prediction 302 331 - -
Vivi1g05584 998 CDD KISc_C_terminal 406 735 - -
Vivi1g05584 998 MobiDBLite consensus disorder prediction 958 998 - -
Vivi1g05584 998 MobiDBLite consensus disorder prediction 846 866 - -
Vivi1g05584 998 Coils Coil 740 767 - -
Vivi1g05584 998 SMART kinesin_4 406 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05584 998 MobiDBLite consensus disorder prediction 939 998 - -
Vivi1g05584 998 PANTHER KINESIN-LIKE PROTEIN KLP-3 51 945 IPR027640 GO:0003777|GO:0007018
Vivi1g05584 998 ProSiteProfiles Kinesin motor domain profile. 408 733 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05584 998 MobiDBLite consensus disorder prediction 186 235 - -
Vivi1g05584 998 Gene3D - 36 167 IPR036872 -
Vivi1g05584 998 MobiDBLite consensus disorder prediction 800 820 - -
Vivi1g05584 998 MobiDBLite consensus disorder prediction 806 820 - -
Vivi1g05584 998 Coils Coil 332 352 - -
Vivi1g05584 998 MobiDBLite consensus disorder prediction 867 890 - -
Vivi1g05584 998 MobiDBLite consensus disorder prediction 833 890 - -
Vivi1g05584 998 PRINTS Kinesin heavy chain signature 481 502 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05584 998 PRINTS Kinesin heavy chain signature 683 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05584 998 PRINTS Kinesin heavy chain signature 603 620 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05584 998 PRINTS Kinesin heavy chain signature 634 652 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi1g05584 998 SUPERFAMILY Calponin-homology domain, CH-domain 45 187 IPR036872 -
Vivi1g05584 998 Gene3D Kinesin motor domain 403 773 IPR036961 -
Vivi1g05584 998 Coils Coil 388 408 - -
Vivi1g05584 998 SMART ch_5 46 164 IPR001715 GO:0005515
Vivi1g05584 998 ProSiteProfiles Calponin homology (CH) domain profile. 44 166 IPR001715 GO:0005515
Vivi1g05584 998 MobiDBLite consensus disorder prediction 187 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05584 Vivi-Chr1 122653096 122659573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05584 396 755 Calmodulin-binding Proteins AT5G65930 41.484 1.86e-77 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05584 K10406 - gmx:100808197 1277.69