Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05574 ATGTTTCAGATAAAGATGGATGATAATTTAGAAAGTCCTAGTAGTATTGCATGTAGTGATTTTAGCTTTGCCTTATCAATTACTAGTAGTGATGATTCTGAAGAATGTGAGACTAGTAATAACTCCCCAGGGCTAGTTGCTAGACTCATGGGTTTGGATTCATTGCCTCCAGTTTCAGCTCTCTCTCATGTAGATTTCATAAACATGCCACTTGAGTCAAACAATAACCTTTTGTCTCCTATCAAAATCCATGGTTATATGAAACCTAGGAATGCAGCAGATATAGTGTGTGAGGAAAGTCCTCAACCATATATTAGAAACAGAATGTCTTCCTTGAGAACTCTTGAACTGCAAGAGAAGTCGCAAGCGGCGCAGCACGAATCCAGGTTCAATGTGAATGGAAAAGCTACTGAGAGGAGAAGAAATTTATATAAGGCTGCTCCAACCTTCAAAGACTCGAGAGATTCGGGAAATAGTAGTTCCTTGCATGGTAAAGGAAAATCTGTTTCACTTGCAACATCATCTAAAACCGATGTTCTAAGTAGGGATACATTGAATTTGAATGGAAATAGGAGATGCATGAAGCAGAAAGAGATTAAATCGAACCAAAAAAGTTGTATTGGTCGAAACAGCGATGTTCTTAGGCAGAATGGTTTAACCAGCAAAGGTGAATCAACTACAAAAGTACTTAACAATAAGCCAACACGAACCTGTTCTTCGGAAAATTTGACCGGAGCTAGGAAGACAACTAACAAATGTGCTGTTAATTCCAGCATTGAATCCAAAAGGTCGAGCACGAGAGTTGCTGATAAGCAAAAGGAGTTATCAGTATCCAAAAGAACGAGTTCTTCTTCGCAAAAGAAGAGGTCTGATCAGATTCAGAATGGCGCACGAGGTTCTGATAATGCAGTTAATATTTATGAAAGCAAGTCCATAAAATGTAATGTTACAACTGATGAAAGTATTTACAATGGTTCATTTAGCATGAAAGAAAGCAGGGACGTCATTTCATTCACATTTACTTCTCCATTGAGGAGAAACAAGCCTGAGTCGCGAACCACTACCGAGCAAGCGATGGAAACAAGGACCGGAATTGATGTCAATTCTTTTGATCACAGCGGTGAGATTTATCCCGAAAAGTTATCATTATCTCCTACAAGAATTGATCTAATAGATATTGATGCATTAAGTGTCATGTTATCTCACATTAACCCACCTCAATGCACCTTGGAAGTAGAAGATTGTTCTGTTGGTTTTAAATCTATTTCGGAGAACAGATTTAACAGCATGATATCAGAACCAATAGAAGACAGAACAGTTTATTCTACCATGCAAGATGAAGAAGTATCTAGCTCTCAAATAAATGAATCTATAACACCAGAACACAAGATGAATTGGCCTGAGAAAAGCTCTACAAGATCAGAAAGGATGATGGAACTTGAATATGTAAAGGATATACTCAGCAATGCAGAATTGATGGCAGAAGAATTAGCAGTGGATGAAACCGAAAATACGATAATGCCGAGTCTCTTCGATACGTTGGAGAATCAGAGAACTGAAGTAGAAAGCTATGAAAAGTACTCCAAGCTTCAAAGGAAGGCTATATTTGACTGTGTAAGTGAGTGTTTAGGATCAAAATGTAGGCAAGTTTTTGTTGCAAAGTGCAAAGCATGGCCTAGATGGGTAACATTTATGAGGAAGAGGTTGTTAACAGAAGAAGTGTACAAGGAAATATTGGAGTATAGAAGCATGGAAGAAGAGGTAGTTGTGGATGAGATTATCAGAAAGGACATATGCACTCCATTGGGTAGATGGCTTGACTTTGACATTGAAGCCTTTGAAAATGGCTTAGAAATTGAGCTTGACATAGTAACCATTTTGATAGATGAGTTGGTTTCTGATTTGTGGCTTGTTTAA 1917 0.3803 MFQIKMDDNLESPSSIACSDFSFALSITSSDDSEECETSNNSPGLVARLMGLDSLPPVSALSHVDFINMPLESNNNLLSPIKIHGYMKPRNAADIVCEESPQPYIRNRMSSLRTLELQEKSQAAQHESRFNVNGKATERRRNLYKAAPTFKDSRDSGNSSSLHGKGKSVSLATSSKTDVLSRDTLNLNGNRRCMKQKEIKSNQKSCIGRNSDVLRQNGLTSKGESTTKVLNNKPTRTCSSENLTGARKTTNKCAVNSSIESKRSSTRVADKQKELSVSKRTSSSSQKKRSDQIQNGARGSDNAVNIYESKSIKCNVTTDESIYNGSFSMKESRDVISFTFTSPLRRNKPESRTTTEQAMETRTGIDVNSFDHSGEIYPEKLSLSPTRIDLIDIDALSVMLSHINPPQCTLEVEDCSVGFKSISENRFNSMISEPIEDRTVYSTMQDEEVSSSQINESITPEHKMNWPEKSSTRSERMMELEYVKDILSNAELMAEELAVDETENTIMPSLFDTLENQRTEVESYEKYSKLQRKAIFDCVSECLGSKCRQVFVAKCKAWPRWVTFMRKRLLTEEVYKEILEYRSMEEEVVVDEIIRKDICTPLGRWLDFDIEAFENGLEIELDIVTILIDELVSDLWLV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05574 638 MobiDBLite consensus disorder prediction 216 263 - -
Vivi1g05574 638 Pfam Domain of unknown function (DUF4378) 479 630 IPR025486 -
Vivi1g05574 638 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 28 59 - -
Vivi1g05574 638 MobiDBLite consensus disorder prediction 278 302 - -
Vivi1g05574 638 MobiDBLite consensus disorder prediction 216 302 - -
Vivi1g05574 638 MobiDBLite consensus disorder prediction 145 176 - -
Vivi1g05574 638 MobiDBLite consensus disorder prediction 152 176 - -
Vivi1g05574 638 Pfam DUF761-associated sequence motif 38 58 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05574 Vivi-Chr1 122559909 122562555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05574 53 635 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 28.804 1.30e-38 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05574 - - vvo:131627516 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05574 1 122559909 122562555 Vivi1g05574 1 122559909 122562555 ECH