Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05519 ATGGGTATTACCGTCAATTCAGATTCAAAGCCAACAACAGTTGAGATCAAAGAGCTGAAATTCACTTATCCTGGAATCGACGGCCATCCTCCGCCGGGTTCCAAACCTCTCATACAAGACTTCTCTCTCAACCTCTTCTCCGGTGATCGGTGCCTTCTCGTCGGATCCAATGGTGCCGGAAAGACTACGATTCTGAAGATATTGGGAGGGAAACACATGGTGGAGCCGGACATGGTTCGTGTTCTTGGAAGATCGGCTTTTCATGATACAGCTTTGGAATCTTCGGGTGATTTGTGTTATCTTGGTGGTGAGTGGAGAAGAGATGTTGCTTTTGCTGGTTTTGAAGTTCCAATACAGATGGATATTTCTGCTGAGAAAATGATATTTGGTGTGGCTGGCATTGATCCTCAAAGAAGAGCAGAGCTAATCAAGGTATTAGATATCAATCTTTCATGGAGATTGCACAAAGTATCTGATGGTCAGAGAAGAAGAGTGCAAATTTGTATGGGCCTCCTCAAACCATTTAAGGTTCTTCTGCTGGATGAGATAACGGTCGACCTTGATGTTCTAGCCAGAGCTGACCTTCTGAAGTTTCTAAAAAAGGAATGTGATGAGAGGGGTGCCACAATTATATATGCAACACATATATTTGACGGTCTTGACGATTGGCCAACAAATATTGTTTATGTAGCTCATGGAAGGCTGCAATTAGCAATGCCTATAGAGAAAGTCAAAGAGATTAGCAAATTGTCACTAATGAGAACGATAGAAGCTTGGCTACGAAAAGAACGAGATGAAGATAGAAGAAAAAGGAAAGAAAACAAGGCGGCTGGCCTTCCTGAATTTGAAAAGCAAATTGATGGAAGCCGTGTGGTTGGGGGGGATCCTGCACGTGCTTCAGTTCGAGTTACTAATAATGGCTGGGCCGCAGGCCGGTTACATTCCACCATTGCTGGTGAAGAAAACTTCGTCCTAAGCTCAAACCGAGTATTGAGGGGGTAA 1002 0.4391 MGITVNSDSKPTTVEIKELKFTYPGIDGHPPPGSKPLIQDFSLNLFSGDRCLLVGSNGAGKTTILKILGGKHMVEPDMVRVLGRSAFHDTALESSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIFGVAGIDPQRRAELIKVLDINLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLKKECDERGATIIYATHIFDGLDDWPTNIVYVAHGRLQLAMPIEKVKEISKLSLMRTIEAWLRKERDEDRRKRKENKAAGLPEFEKQIDGSRVVGGDPARASVRVTNNGWAAGRLHSTIAGEENFVLSSNRVLRG 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05519 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 14 257 IPR003439 GO:0005524
Vivi1g05519 333 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 13 259 - -
Vivi1g05519 333 Gene3D - 9 288 IPR027417 -
Vivi1g05519 333 Pfam ABC transporter 39 184 IPR003439 GO:0005524
Vivi1g05519 333 SMART AAA_5 47 234 IPR003593 GO:0016887
Vivi1g05519 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 248 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05519 Vivi-Chr1 121101313 121104179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05519 14 211 Calmodulin-binding Proteins AT2G36910 24.186 4.96e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05519 K12608 - gmx:100782386 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05519 1 121101313 121104179 Vivi1g05519 1 121101313 121104179 ECH