Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05471 ATGTTTTTCTTCACTATCTTTCCACTTTTACTCTCTCTTTTTTTCATATACAAATATTTGTATCATTTCAACAATTCTTCTGCCACCACAAAAAACTCACCACCTTCACCTCCAAGATTTCCACTGCTTGGTAATCTCCATCAACTTGGCTTATCCCGTCACCGCACACTCCAAACTTTATCTCACAAATATGGCCCATTAATGCTTCTTTATTTTGGCAAGGTTCCAGTACTTGTAGTTTCATCTTCTGATGCAGCAAGAAAAGTAATGAAAACTCACGATTCGGTCTTCTTAGATAGGCCACAAAGGAAAATCTTTGATATCCTTTTGTACGGTTCCAAAGACATGGTAAGTTGTGCACCTAGTGAGTATTGGAGGAAAATAAGGAGTATCAAGGACATGTTTGCTGGAGGTGCTGACACGATATACACAGTACTAGAATGGGCGATGACAGAGTTGTTAAGAGACGAAACTGTTATGCATAAATTGCAAGATGAAGTGAGAACCGTTGTTGGCAACAAAAATCATGTATCTGAACAAGATTTGGTTAACATGACCTACTTGAAGGCAGTGATAAAAGAAACACTTCGCCTCCATTTACCGATTCCCTTAGTCCCTCGGAGATGTAAGGAAGATATCAAATTAGATGGGTATGACATTGCAGCAGGCACACATGTAATTGTTAATGCTTGGGCTATTGCTAGAGACCCTTCGAGTTGGGAACAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTTTAAGGGATTAGATTTTGAACTTATACCATTTGGAGCTGGAAGAAGAGGTTGTCCTGGAGTGTTGTTTTCTATAGCTGTGAATGAGTTGGTGCTAGCAAACCTTGTTTGCCAATTTGATTGGAAATTGCTTGCTGGAGTATCACCAGAGAATCTGGACATGTCTGAAACTATTGGCCTTATTTGTCATAGAAAACACCCTCTCCTTGCAGTAGCAACTAAATATGAGAAAAAATTGACTAAGGATACATAA 1023 0.3861 MFFFTIFPLLLSLFFIYKYLYHFNNSSATTKNSPPSPPRFPLLGNLHQLGLSRHRTLQTLSHKYGPLMLLYFGKVPVLVVSSSDAARKVMKTHDSVFLDRPQRKIFDILLYGSKDMVSCAPSEYWRKIRSIKDMFAGGADTIYTVLEWAMTELLRDETVMHKLQDEVRTVVGNKNHVSEQDLVNMTYLKAVIKETLRLHLPIPLVPRRCKEDIKLDGYDIAAGTHVIVNAWAIARDPSSWEQPLEFKPERFMNSSIDFKGLDFELIPFGAGRRGCPGVLFSIAVNELVLANLVCQFDWKLLAGVSPENLDMSETIGLICHRKHPLLAVATKYEKKLTKDT 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05471 340 PRINTS P450 superfamily signature 190 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 PRINTS P450 superfamily signature 266 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 PRINTS P450 superfamily signature 137 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 PANTHER CYTOCHROME P450 71B11-RELATED 131 330 - -
Vivi1g05471 340 Pfam Cytochrome P450 34 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 Pfam Cytochrome P450 132 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 Gene3D Cytochrome P450 19 129 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 268 277 IPR017972 GO:0005506|GO:0016705
Vivi1g05471 340 FunFam Predicted protein 135 327 - -
Vivi1g05471 340 Gene3D Cytochrome P450 130 337 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 PRINTS E-class P450 group IV signature 234 252 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 PRINTS E-class P450 group IV signature 259 275 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 PRINTS E-class P450 group IV signature 275 293 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 PRINTS E-class P450 group IV signature 185 201 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05471 340 SUPERFAMILY Cytochrome P450 31 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05471 Vivi-Chr1 119800192 119801374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05471 10 333 Cytochrome P450 AT3G26180 40.331 1.89e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05471 - - vvo:131615667 691.804