LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g05425	ATGTCTAAATATAGTGAATCAACTTTGCATCTCGATAGTGACGGTGAAGAGGTGGAATTCACCAGTGTTAACGGTGATGGTAGTGATAGAGATACGTTGGAGAAAGAGGATTGTAATGGTCATAAATGTTTAAGTGAAGTTACAGATGAAGATATAAGAGCTAGGGAATTTAGCACAGAGGAAGAAGCGATACAATTTTATATAACATATGCTCATTTCCATGGATTTGCGGTAAGAAAAGATGATATTGTACGCGATCATAAAAGGAAAATTGTTTTCCGTCAATTACTTTGCAATAAAGAAGGAAAGAGTGAAAGAAAAAATAAGAAGAATGAGGATAAATATCGACCAACTATGCGAACTGGTTGTCTTGCTAGATTTCGAGTAGCCTATGATTATGTTCGTAAGCTTTGGAGAGTTACAAAATTTGAGTCATCTCATAACCATAAATTAACTCCTGCGCGCTTTATTCATTTGATTCCCAATTATCGTAAATTAAGTGAAGCGGATAAAGAAGTTGTCAATGGTTTGCATTCACAAGGCGTTAGAACTTGTCATATATTGGGCTTTTTGATGGGGCAAAAAGGAGGTCATGAAAATCTTGGATTTATTAAAAAAGACCTATACAACTATACGCATCATCAAGGAAGGGTAAGAATTGAAGGTGGTGATACTTTTGCCACTTTGAGTTATTTTCAAGGAAAAGCTGATAGTGATTCAACCTTTTTTTTTCTTCAGAGTTTACCTTTACAGATGACGGGCGGTTAG	768	0.3555	MSKYSESTLHLDSDGEEVEFTSVNGDGSDRDTLEKEDCNGHKCLSEVTDEDIRAREFSTEEEAIQFYITYAHFHGFAVRKDDIVRDHKRKIVFRQLLCNKEGKSERKNKKNEDKYRPTMRTGCLARFRVAYDYVRKLWRVTKFESSHNHKLTPARFIHLIPNYRKLSEADKEVVNGLHSQGVRTCHILGFLMGQKGGHENLGFIKKDLYNYTHHQGRVRIEGGDTFATLSYFQGKADSDSTFFFLQSLPLQMTGG	255

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g05425	255	MobiDBLite	consensus disorder prediction	1	33	-	-
	Vivi1g05425	255	PANTHER	OS01G0519700 PROTEIN	51	246	-	-
	Vivi1g05425	255	Pfam	FAR1 DNA-binding domain	65	152	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi1g05425	Vivi-Chr1	118788592	118789359	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Vivi1g05425		FAR1	1.4e-18	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g05425	-		-	vvo:131652578	529.25