Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05424 ATGGGATATCTAATTGCTATAGCCATGTTGATTTTCACTATTATGATAATGACAAAGATTTGGAGAATATGTGTAGTTCTCTTTTGGAGGCCATATGCATTTACTAAGCACTTTCGAAAGCAAGGAGTCACGGGGCCACCATCTTACTCATGTGTTCATGGTTCTCTTCATGATATCAAAACAATGATGAAGGATGCAAGAAAAATGATTATGGATAAACACTCACATGATATTACTCAAAGGGTTCTTCCTCACTATCACATATGGTCCTCCTTATATGGAGAGAGATTTCTATATTGGTATGGAACAGAACCAAGGATTTGCATAACTGATGCAGAGCTGGTGAAGGAGATTTTATCCAATAAATTTGGTTTCTATGAAAAACGAAAAGTAAGGCCTTCAACAGTAAAAATGATAGGAAATGGGTTAGTTCTACTGAGAGGAGTGGATTGGGTTAAGCGCAGAAGAATACTCAATCCTGCTTTCTCCATTGATAAACTCAAGGTTATGATGAGTAGAATGGCAGCATGTACCATTTCCATGCTAGATGAATGGAAAAGGCAATTAGACATTAAAGCAAAGAACACATCATTGACGATTGAGATGAGTAAAGAATTTCGAGAACTAACATCTGATATAATAGCTCATACTTCCTTCGGTACAAGTTTTGCTCATGGAAAAGAAGCCTTTAATGCGCAAACACAACTTCAACACCTTATCGTAGCTTCAAGCTCTGATGTTTTCATTCCTGGCACTCAATATTTTCCTACTAAGTCAAATTTGGAGATATGGAAGCTTGATAGAAAAATGAAAAAATCACTACAATATATTATTGAAAGTAGGTTGAATTCTCAATCAGATTGCTCCTCTTATGGAGATGATCTATTAGGCATAATGATGGATACAAAAAATGATGGTCCTAATAAGCTGAACATGAATGAAATCATGGAAGAGTGCAAGACATTTTTCTTTGCTGGTCATGAAACCACCTCAAACTTACTTGTTTGGACTGTCTTTTTGTTGAGTTTGCATAAAGATTGGCAAGAAAAACTCAGACAAGAGGTCATGCAGATTTGCGGCATGGAAATTCCTGATCCTGATATGCTATCAAAGTTAAAAATGGTGAATATGGTGTTGTTGGAAGTATTAAGATTGTATTGTCCTGCAATAGAACTAGAAAGAATGGCTTCAAAAGATATGAAACTAGGAAATTTGATGATCCCAAGAGGAACATGCCTCATGATCCCAATTACAATGATTCATAGAAGTAAAGAATACTGGGGTGAAGATTCAAACAAGTTCAATCCAATGAGATTCATAAATGGAGTTTCTAAGGCTGCAAAACACCCAAATGCACTACTTGCATTTTCTGTTGGTCCAAGAAACTGCATTGGTCAGAATTTTGCTACGATGGAAGCTAAAACAGTGATGACTTTAATTCTTCAGAGGTTTTCTTGGTCTCTTTCTCCTGACTATCAACATGCACCTGTTAATAACCTTACTTTGCAGCCACAACATGGTCTTCCCATCATTCTAAAACCATTGCAGTTATAA 1554 0.3629 MGYLIAIAMLIFTIMIMTKIWRICVVLFWRPYAFTKHFRKQGVTGPPSYSCVHGSLHDIKTMMKDARKMIMDKHSHDITQRVLPHYHIWSSLYGERFLYWYGTEPRICITDAELVKEILSNKFGFYEKRKVRPSTVKMIGNGLVLLRGVDWVKRRRILNPAFSIDKLKVMMSRMAACTISMLDEWKRQLDIKAKNTSLTIEMSKEFRELTSDIIAHTSFGTSFAHGKEAFNAQTQLQHLIVASSSDVFIPGTQYFPTKSNLEIWKLDRKMKKSLQYIIESRLNSQSDCSSYGDDLLGIMMDTKNDGPNKLNMNEIMEECKTFFFAGHETTSNLLVWTVFLLSLHKDWQEKLRQEVMQICGMEIPDPDMLSKLKMVNMVLLEVLRLYCPAIELERMASKDMKLGNLMIPRGTCLMIPITMIHRSKEYWGEDSNKFNPMRFINGVSKAAKHPNALLAFSVGPRNCIGQNFATMEAKTVMTLILQRFSWSLSPDYQHAPVNNLTLQPQHGLPIILKPLQL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05424 517 SUPERFAMILY Cytochrome P450 79 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Vivi1g05424 517 Gene3D Cytochrome P450 28 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 507 - -
Vivi1g05424 517 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05424 517 FunFam Cytochrome P450 734A1 28 516 - -
Vivi1g05424 517 Pfam Cytochrome P450 92 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05424 Vivi-Chr1 118682991 118687160 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05424 21 516 Cytochrome P450 AT2G46960 53.785 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05424 K20660 - aprc:113872106 775.778