Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05423 ATGGGATATCTAATTGCTATAGCAATGTTAATTCTCACTATTGTGATGATTACAAAGATTTGGAGAGTATGTATAATTCTCTTTTGGAGACCATATGCATTTACTAAGCACTTTCGAAAGCAAGGAGTCATAGGACCACCATCTTACTCATGTGTTCATGGTTCTCTTCATGATATCAAAACAATGATGAAAGATGCAAGAAAAATGATTATGGATAAACACTCACATGATATTACTCAAAGGGTTCTTCCTCACTATCACATATGGTCCTCTTTATACGGAGAGAGATTTCTATATTGGTACGGAACAGAACCAAGGATTTGCATAACTGATGCCGAGCTGGCAAAAGAGATTTTATCCAATAAATTTGGTTTTTACGAAAAACCAAAAGTAAGGCCTTCATTTGTAACATTGATAGGATATGGATTAGTTCTACTGAGAGGAGTGGATTGGGTTAAGCGCAGAAGAATACTCAATCCTGCTTTTTCCATGGATAAACTCAAGGTTATGATAAGTAGAATGGCAGCACCAGCATGTACCATTTCCATGTTAGATGAATGGAAAAGACAATTAGCCATTGAAGCAAAGAACAAATCATTTACAATAGAGATGAGTCAAGAATTTCGAGAACTAACATCTGATATAATAGCTCATACTTCCTTCGGTACGAGCTTTGTTCATGGAAGAGAAGCCTTTGATGCACAAACACAACTTCAACACCTTATTGTAGCTTCAACTTCCGATGTTTTCATTCCTGGAACTCAATATTTTCCTACTAAGTCAAATTTGGAGATATGGAAGCTTGATAAGAAAATGAAGAAATCACTACAATGCATTATTGAAAGTAGGTTGAATTCTCAATCAGTTAGCTCATCTTATGGAGATGATCTATTAGGCATAATGATGGATACAAAAAATGATGGTCCTAATAAGTTGAACATGAATGAAATCATTGATGAATGCAAGACCTTTTTCTTGGCTGGTCATGAAACCACTTCAAGCTTACTTGTTTGGACTGTCTTTTTGTTGAGTTTGCATAAAGATTGGCAAGATAAACTCAGACAAGAGGTCATGCAGATTTGCGGCATGGAAATTCCTGATCCTGATATGCTATCAAAGTTAAAAATGGTGAATATGGTATTGTTGGAAGCATTAAGATTGTATTGTCCTGCAATAGAACTAGAAAGAATGGCTTCAAAAGATATGAAACTAGGAGATTTAATGATCCCAAGAGGAACATGTCTCATGATCCCAATTATAATGATTCACAGGAGTAAAGAATACTGGGGTGAAGATTCAAATGAGTTCAATCCAATGAGATTCATAAATGGAGTTTCTAAGGCTGCAAAACACCCAAATGCACTACTTGCATTTTCTATTGGTCCAAGAAACTGCATTGGTCAGAATTTTGCTATGATGGAAGCTAAAACAGTGATAACTTTAATTCTTCAGAGGTTTTGTTGGTCTCTTTCTCCTGACTATCAACATGCACCTGTTAATAACCTTACTTTGCAGCCACAACATGGTCTTCCCATCATTGTAAAACCATTGCAGTTTTAA 1560 0.3571 MGYLIAIAMLILTIVMITKIWRVCIILFWRPYAFTKHFRKQGVIGPPSYSCVHGSLHDIKTMMKDARKMIMDKHSHDITQRVLPHYHIWSSLYGERFLYWYGTEPRICITDAELAKEILSNKFGFYEKPKVRPSFVTLIGYGLVLLRGVDWVKRRRILNPAFSMDKLKVMISRMAAPACTISMLDEWKRQLAIEAKNKSFTIEMSQEFRELTSDIIAHTSFGTSFVHGREAFDAQTQLQHLIVASTSDVFIPGTQYFPTKSNLEIWKLDKKMKKSLQCIIESRLNSQSVSSSYGDDLLGIMMDTKNDGPNKLNMNEIIDECKTFFLAGHETTSSLLVWTVFLLSLHKDWQDKLRQEVMQICGMEIPDPDMLSKLKMVNMVLLEALRLYCPAIELERMASKDMKLGDLMIPRGTCLMIPIIMIHRSKEYWGEDSNEFNPMRFINGVSKAAKHPNALLAFSIGPRNCIGQNFAMMEAKTVITLILQRFCWSLSPDYQHAPVNNLTLQPQHGLPIIVKPLQF 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05423 519 FunFam Cytochrome P450 734A1 28 518 - -
Vivi1g05423 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 509 - -
Vivi1g05423 519 Pfam Cytochrome P450 92 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vivi1g05423 519 Gene3D Cytochrome P450 68 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 SUPERFAMILY Cytochrome P450 79 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g05423 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05423 Vivi-Chr1 118633280 118638527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05423 21 518 Cytochrome P450 AT2G46960 53.175 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05423 K20660 - aprc:113872106 776.548