Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05389 ATGGTTAGAATCCATGCAATACTGATCTCTACTTTGGTTCTAGTTATTCTCTCAGTTTCAACATTGGCATCATCCTCATCTTTGAAGTTTGGTTTCTATAAAACAACATGTCCATCCGCTGAAGCAATTGTTAGAAGAGCGGTAAACAAAGCTGTCTCACTCAACCCAGGCATAGCTGCTGGTTTGATTAGAATGCATTTTCATGACTGTTTTGTAAGAGGATGCGATGGTTCTGTATTATTACAATCCACACCAGGTAATCCATCTGAGAGAGACCATCCTGCAAACAATCCAAGTTTACACGGCTTCGAAGTCATCAACGAAGCTAAGGCACAAATAGAAGCCGTATGTCCTAAAACTGTGTCATGTGCAGACATTCTTGCTTTTGCGGCTAGAGACAGTACTCGCAAAGTTAGTGGAGGCATAGACTACTCAGTACCATCAGGACGCAGAGATGGTCGAATCTCTATCATGGCCGAAGTCACACAAAATCTACCACCACCAACTTTCAAAGCGGAGGAACTTATCAAACGTTTTTCCATAAAAGGTTTATCAGCAGATGAAATGGTTACACTTTCTGGAGCTCATTCAATTGGTGTCTCACATTGTTCCTCTTTCTCAAACCGGTTATACTCTTTCAATGCTACGTTTTCTCAAGATCCTTCAATGGACCCTAACTTTGCTATGTTGTTGAAATCCAAGTGTCCACCACCACAATCACAGACAAGAGACCCAACGGTGGTGCTTGATGGTTCGACGCCTAATGATTTGGACAACATGTACTATATGAAGTTGAAGAATAAGCGTGGTTTATTAACTTCAGATCAAACATTGGCGGATAGTGACTTAACAAAGAGAATGGTGTTAAAAAATAGCAGACATGGTGCAATATGGAGAGTGAAGTTTGCAAAGGCAATGGTGCATATGGGTTCCATACAAGTCTTGACAGGTTCTCAAGGTGAGATTAGAGAACGCTGCAGCGTCGTTAATATTAATTAA 999 0.4104 MVRIHAILISTLVLVILSVSTLASSSSLKFGFYKTTCPSAEAIVRRAVNKAVSLNPGIAAGLIRMHFHDCFVRGCDGSVLLQSTPGNPSERDHPANNPSLHGFEVINEAKAQIEAVCPKTVSCADILAFAARDSTRKVSGGIDYSVPSGRRDGRISIMAEVTQNLPPPTFKAEELIKRFSIKGLSADEMVTLSGAHSIGVSHCSSFSNRLYSFNATFSQDPSMDPNFAMLLKSKCPPPQSQTRDPTVVLDGSTPNDLDNMYYMKLKNKRGLLTSDQTLADSDLTKRMVLKNSRHGAIWRVKFAKAMVHMGSIQVLTGSQGEIRERCSVVNIN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05389 332 Pfam Peroxidase 44 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 Gene3D Peroxidase, domain 2 166 309 - -
Vivi1g05389 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Vivi1g05389 332 ProSiteProfiles Plant heme peroxidase family profile. 27 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 FunFam Peroxidase 31 175 - -
Vivi1g05389 332 CDD secretory_peroxidase 29 329 IPR033905 GO:0004601|GO:0042744
Vivi1g05389 332 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vivi1g05389 332 PANTHER PEROXIDASE 25-RELATED 16 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 Gene3D - 31 330 - -
Vivi1g05389 332 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 FunFam Peroxidase 166 309 - -
Vivi1g05389 332 SUPERFAMILY Heme-dependent peroxidases 28 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05389 332 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05389 Vivi-Chr1 117990412 117992050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05389 23 328 Peroxidase AT3G21770 47.097 1.67e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05389 K00430 - qsa:O6P43_010907 474.937