Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05373 ATGGTTTCCAAACCTAACGATTCTCCTCTAATTCTCCATCAAAAATTAGGTGAAGAGCCGCCCAATGATGATGCTGTTGGAGCCTTGTCCGCCAAGATAAATCAGTTGAAAAAGCAAATCCAGGCAGAGAGAATTGATTTCATTGCTGAAAAACTTCAGACGAACCAGAAGAAGCTACAATGCCATATTTCAGGAATAATGTCGGCAGTATCAACCAGGGACTCTTCACAGACGGAAGAAAACAAGACATGTTCAATTCTTTCTTCAAGAATGGACCATCCTTTATGTAAATTTGACAGCTTTAACCATGTTTCTGGAGACAAAGACCACAGCAATCAAGACATGTCACCTGCAACAAGCATCAAGATTCCACGTATTGAAAGATTGCCACCATATACATCTTGGATATTTTTGGATAGGAATCAGAGAATGGCTGAAGATCAGTCAGTCGTTGGAAGAAGACGGATCTACTATGATCAACGTGGAAGTGAAGCATTGATATGTAGTGACAGTGAGGAAGAACTAACGGAACCTGAGGAAGTAAAACATGAATTTTGTGAGGCCGAAGACCGTATTTTATGGATGGCATTTGAGGAACATGGGTTAAATGAGGAGGTATTGAATGTTGTTTGCAAGCATGTTGGGGGCACCAGTTTAGAAATCCAGGAGAGGTACAAAAGTATCAGGGAAAATACTACTGGTAGGTTGGACCAGCATTCAAAAAGCTTAGGAGAACATGACTCTCCTATGAGCATGTATCTAGAGAAAACCCTGAGTGATGCACTAGATTCTCTTGATAACCTTTTTTGTCGCCGGTGCCTGATTTTCGACTGTCGACTGCATGGCTGTTCTCAACCTTTGATATGTCCGAGTGAAAAGCAAACAGTTTGGTCTGAGCCTGAAGGTAACAGGAAACCATGCGGTGATCAATGTTACCTCCAGTTAAATGTTGTCAAAAAATTGCCAAAAGATACAACTTCTGGATCTTTTCGGGATAAGAAAATTACAATTGTAGAGGAGACAAATGGGATAATGTCACCACCGCCCGCTGCTGAAGAACCTGGCAATCAGAGTACTAAACTTCCGACAAGACCCGATTGCCATGGATATCTTAATTTAAATGACCATGTTTCAGAAAATATAGGGAAACGAAAAGTCACAAATCAGTCAGATTCAAGATTGCCTCCTGATTCTCAGAACTCTAGTAAAAAGCTAAAAAGTATCTCAGATGATGTAGTTACTGTAATTAGTGATAATAGCAAGGACCTAAACTTGGGTGCATGTGATGAAAACAAACATATAAATACTTGTGCAGTTTTGGACAAATCTGTTGAACACTCTTCGAATAAACTAAAAGTTCCTTCTAGCACTTGCCACAGTGAGAATGACAAAGGTGTTGTCAATGGATCCAAAGATGTCACAAATGAGACAGAACTTAAAAGGCCGGTGAATTCAATGGAAGGACAGGTTGATGAAATGCTAGGCTTCTCAGATTGGAAACCTCTTGAGAAAGAGTTATACCTGAAGGGAATAGAAATGTTTGGCAGGAACAGTTGCCTCATAGCTAGGAACTTACTTTCTGGTTTGAAGACTTGCATGGAAATATCTAGTTACATGCATGATCGAGGAGTGTCAATGCCCCACAGATCCATTGCTGCAGCTAGTTCAATCATGGATGACGAGGGAAATTTTGATGCAGAGTGCACAGACCAAGACATGCCATCTAGGTCACGGTTGCTGAGAAAAAGAGGCAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGTCACCCAACAACATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACGCCTTGTGAATGTCAATCAATGTGTGGAAAGGATTGCTCTTGTGTTAATGGTGGGACATGCTGTGAAAAATACTGTGGTTGTTCGAAGAGCTGCAAAAATCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGTGAATGTGATCCAGACGTCTGTCGAAACTGTTGGGTTAGCTGTGGGGATGGCACATTGGGGGAGCCACCACGGCGTGGAGAAGGTCAATGCGGAAATATGAGACTTCTTTTAAGGCAACAACAGAGGATTCTCTTGGGGAAGTCGGATGTTGCAGGATGGGGAGCCTTCTTGAAGAATCCTGTTAACAAAAATGATTACCTAGGAGAGTACACTGGTGAATTGATCTCGCACAGAGAAGCTGATAAGCGTGGAAAAATATATGATCGTGCAAATTCATCTTTCCTTTTCGATTTGAATGAGCAGTTTGTTCTTGATGCTTATCGGAAAGGAGACAAATTGAAATTTGCAAACCACTCATCAAACCCCAACTGCCATGCAAAGGTGATTTTGGTTGCTGGAGATCATCGTGTTGGCATATTCGCCAAGGAACACATTGATGCCAGTGAGGAGCTCTTCTATGATTATCGCTATGGACCAGATCAAGCACCTCCATGGGCTCGTAAACCTGAGGGTTCCAAGAGAGACGAATCAGAAGGTAGGGCGAAGAAACATCAATCTCATTGA 2586 0.4196 MVSKPNDSPLILHQKLGEEPPNDDAVGALSAKINQLKKQIQAERIDFIAEKLQTNQKKLQCHISGIMSAVSTRDSSQTEENKTCSILSSRMDHPLCKFDSFNHVSGDKDHSNQDMSPATSIKIPRIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQRGSEALICSDSEEELTEPEEVKHEFCEAEDRILWMAFEEHGLNEEVLNVVCKHVGGTSLEIQERYKSIRENTTGRLDQHSKSLGEHDSPMSMYLEKTLSDALDSLDNLFCRRCLIFDCRLHGCSQPLICPSEKQTVWSEPEGNRKPCGDQCYLQLNVVKKLPKDTTSGSFRDKKITIVEETNGIMSPPPAAEEPGNQSTKLPTRPDCHGYLNLNDHVSENIGKRKVTNQSDSRLPPDSQNSSKKLKSISDDVVTVISDNSKDLNLGACDENKHINTCAVLDKSVEHSSNKLKVPSSTCHSENDKGVVNGSKDVTNETELKRPVNSMEGQVDEMLGFSDWKPLEKELYLKGIEMFGRNSCLIARNLLSGLKTCMEISSYMHDRGVSMPHRSIAAASSIMDDEGNFDAECTDQDMPSRSRLLRKRGKTRKFKYSWKSAGHPTTWKRIADGKNQSCKQYTPCECQSMCGKDCSCVNGGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGTLGEPPRRGEGQCGNMRLLLRQQQRILLGKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNEQFVLDAYRKGDKLKFANHSSNPNCHAKVILVAGDHRVGIFAKEHIDASEELFYDYRYGPDQAPPWARKPEGSKRDESEGRAKKHQSH 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05373 861 MobiDBLite consensus disorder prediction 378 406 - -
Vivi1g05373 861 ProSiteProfiles CXC domain profile. 602 701 IPR026489 -
Vivi1g05373 861 MobiDBLite consensus disorder prediction 451 470 - -
Vivi1g05373 861 SMART CXC_2 650 687 IPR033467 -
Vivi1g05373 861 ProSiteProfiles SET domain profile. 715 830 IPR001214 GO:0005515
Vivi1g05373 861 FunFam Putative histone-lysine N-methyltransferase EZH2 616 832 - -
Vivi1g05373 861 Pfam SET domain 726 829 IPR001214 GO:0005515
Vivi1g05373 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 27 860 IPR045318 GO:0006338|GO:0042054
Vivi1g05373 861 Pfam CXC domain 654 685 IPR041355 -
Vivi1g05373 861 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 861 IPR025778 GO:0031519
Vivi1g05373 861 CDD SET_EZH 715 831 - -
Vivi1g05373 861 SMART set_7 715 836 IPR001214 GO:0005515
Vivi1g05373 861 SUPERFAMILY SET domain 588 834 IPR046341 -
Vivi1g05373 861 MobiDBLite consensus disorder prediction 383 406 - -
Vivi1g05373 861 MobiDBLite consensus disorder prediction 1 21 - -
Vivi1g05373 861 MobiDBLite consensus disorder prediction 835 861 - -
Vivi1g05373 861 Gene3D SET domain 616 832 IPR046341 -
Vivi1g05373 861 MobiDBLite consensus disorder prediction 841 861 - -
Vivi1g05373 861 Coils Coil 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05373 Vivi-Chr1 117587336 117595977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05373 704 833 C2H2 Transcription Factor Family AT2G23740 24.490 1.40e-08 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi1g05373 SET 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05373 - - gmx:100808730 1358.97