Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05369 ATGTCTTCTGGTCACCGCCGCGTCAGTTCAGGTTCAGACGGTGGGGATCCACTCCTCCTCGAGGAGAAGAAGAGAAAACGTATGCAGTCGAACCGCGAATCCGCAAAGCGGTCGAGAATGAGGAAGCAGAAACAGGTTGAAGATCTGACCGAAGAAGCTGGCAGATTGAAAAGTGAGAACGAGGGTCTTAAGCAGAAAATTAAGGCGGCCGTGGACGCCCGTACTGAAATGGAGGCGGCAAACAATGTTATTAGGGCACAAACAAAGGAGCTTGAAGATAGATTGCAATTCCTGAACTCGGTGGTGGAAAAGGCTGAAAATGTTAACGGTCGCTCTAATGATATGTCTATGTTTTCTGATCCTCTTCTGAAGCCTTGGTTCATACCTCATTCAAATTATTCTCTCATTGCTTCCAGTGATATGTCGATGCATTGA 435 0.469 MSSGHRRVSSGSDGGDPLLLEEKKRKRMQSNRESAKRSRMRKQKQVEDLTEEAGRLKSENEGLKQKIKAAVDARTEMEAANNVIRAQTKELEDRLQFLNSVVEKAENVNGRSNDMSMFSDPLLKPWFIPHSNYSLIASSDMSMH 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05369 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 10 132 - -
Vivi1g05369 144 MobiDBLite consensus disorder prediction 17 63 - -
Vivi1g05369 144 MobiDBLite consensus disorder prediction 1 63 - -
Vivi1g05369 144 Coils Coil 25 108 - -
Vivi1g05369 144 Gene3D - 21 76 - -
Vivi1g05369 144 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Vivi1g05369 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 68 IPR004827 GO:0003700|GO:0006355
Vivi1g05369 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Vivi1g05369 144 Pfam bZIP transcription factor 22 79 IPR004827 GO:0003700|GO:0006355
Vivi1g05369 144 CDD bZIP_plant_GBF1 24 70 IPR045314 GO:0003700|GO:0006355
Vivi1g05369 144 FunFam BZIP transcription factor 21 72 - -
Vivi1g05369 144 SUPERFAMILY Leucine zipper domain 23 73 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05369 Vivi-Chr1 117535606 117536635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05369 1 141 bZIP Transcription Factor Family AT3G62420 44.444 3.59e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g05369 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05369 K25786 - gmx:780550 156.762