Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05312 ATGGTTGGGTTCTTGTCCAATATTCTGGGGAATGATCTGAAATGTGAAAGCTACTTTATTTTTAGTGGAGAAACTGATCTTGGGAATAATGTTAGGATATTTTTGTATTTTCTTGCTCTTGCTTATTGTTTTATTGGATTATCGGCTATAACGGCCCGATTCTTTCAATCTATGGAAAATGTGGTGAAGCACACAAGGAAGGTTGTGGTGATAGATCCTGTTACTAAAGGTGAAGTCGTTACGCATGAAAAAGTTTGGAATTATACGATTGCAGATATTAGTTTGTTGGCGTTTGGAACTAGTTTTCCTCAGATTTCATTAGCTACTATTGATGCTATACGGAATCTAGGGAACTTGTATGCTGGAGGTTTGGGACCTGGAACACTCGTTGGTTCTGCTGCATTTGACCTCTTCCCCATCCACGCCGTTTGTGTGGTAATTCCAAAAGCAGGAGAATTGAAAAAGATTGCTGATCTAGGAGTATGGATAGTGGAGTTATTTTGGTCATTTTGGGCTTACTTTTGGTTATACATAATTTTGGAGGTATGGACTCCAAACGTGATAACCCTGTCGGAGGCCTTCTTGACAGTACTTCAGTATGGATTACTGTTGATTCATGCTTATGCTCAAGATAAACGTTGGCCCTATATTTCTCTACCTATTGCAAGAGATGAAAGGCCAGTGGATTGGGTGCCAGAAGAAACTCCTAAGCAAAAGTCCCAAGAGATAGTGGAGTGCTCTGAGATATTTCATTTTATTGAAGAAAACAGTGACACTGTTGATATTTTTTCCATTCATTCAGAAAACCCCAGAGATGGGTCGTACATAAGAGTGCCACAAATAGAGGAAGCAGAAAATTCTAACAAAGTTATGGAAACAGAGCTGGAGGATACCAGTTTGCTTACTATATGGAGACAGCAATTTGTTGATGCCCTGACGGTGGAGAGCCAAGAATCTAAAAAGATGAACAATATCTATATCCGCATAGCTAAAATATTCTGGCAGTTGTTGCTTTTGCCATGGAGATTTATGTTTGCTTTTGTTCCACCGTGCCATATTGTTCATGGATGGATTTCTTTCATATGCTCTCTGCTTTTCATCAGTGGGATAGCATATATTGTGACTAAGATAACGGATCTTATAAGTTGTGTCACAGGAATAAATGCCTACGTCATAGCATTTACAGCACTAGCCAGTGGAACCTCATGGCCTGATTTAGTGGCGAGCATGATTGCTGCTGAACGACAAAAAACAGCAGACTCTGCAATTGCAAACATCACTTGCAGCAATTCAGTGAATATATATGTTGGCATTGGTGTTCCATGGCTTATTGATACTTTGTACAATTACATAGCATATAGAGAACCTCTCCGAATCCAAAATGCAGGGGGACTTAGTTTTTCTTTGATTGTTTTTTTCGCTACTTCTGTTGGATGTATCTCAGTTTTGGTTGCTAGGCGTATAGTTTTTGGCGCGGAGCTTGGAGGACCAAGGCTTTGGGCATGGATTACCTGTGCATTTTTCATGCTGCTGTGGGTGATTTTTGTTGTACTATCTTCACTTAAGGTTTCCGGATTCTTTTAG 1584 0.3984 MVGFLSNILGNDLKCESYFIFSGETDLGNNVRIFLYFLALAYCFIGLSAITARFFQSMENVVKHTRKVVVIDPVTKGEVVTHEKVWNYTIADISLLAFGTSFPQISLATIDAIRNLGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVIPKAGELKKIADLGVWIVELFWSFWAYFWLYIILEVWTPNVITLSEAFLTVLQYGLLLIHAYAQDKRWPYISLPIARDERPVDWVPEETPKQKSQEIVECSEIFHFIEENSDTVDIFSIHSENPRDGSYIRVPQIEEAENSNKVMETELEDTSLLTIWRQQFVDALTVESQESKKMNNIYIRIAKIFWQLLLLPWRFMFAFVPPCHIVHGWISFICSLLFISGIAYIVTKITDLISCVTGINAYVIAFTALASGTSWPDLVASMIAAERQKTADSAIANITCSNSVNIYVGIGVPWLIDTLYNYIAYREPLRIQNAGGLSFSLIVFFATSVGCISVLVARRIVFGAELGGPRLWAWITCAFFMLLWVIFVVLSSLKVSGFF 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05312 527 Coils Coil 281 301 - -
Vivi1g05312 527 Gene3D - 88 223 IPR044880 -
Vivi1g05312 527 Gene3D - 309 521 IPR044880 -
Vivi1g05312 527 Pfam Sodium/calcium exchanger protein 356 519 IPR004837 GO:0016020|GO:0055085
Vivi1g05312 527 Pfam Sodium/calcium exchanger protein 36 208 IPR004837 GO:0016020|GO:0055085
Vivi1g05312 527 PANTHER SODIUM/CALCIUM EXCHANGER 13 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05312 Vivi-Chr1 116026629 116031845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05312 6 525 Antiporters AT2G47600 70.913 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05312 K03452 - gmx:100792839 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05312 1 116026629 116031845 Vivi1g05312 1 116026629 116031845 ECH