Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05297 ATGGCAAGTTCAGATCAACAACCAGAGAAAGCACAACCAGTGATGATAGTTGCAATCGACGAGAGCGAACACAGTGCTTACGCTCTCAAATGGACTCTTGATCATTTCTTCAACAACAACAATCCTGTTTTCAAGCTTGTTCTTCTTCATGCTAGACCTTCCGCTACTTCTTCTGTTGGTCTTGCTGGTCCTGTGTATGCAGGAGCTGCTGAGGTTTTGCCGATTGTGGATTCTGATTTGAGAAAGATTGCTGCTAGAGTTGTTGAGAGTGCTAAACAGCTTTGCGTTAAGAAATCGGTAAATGATGTAATAGTGGAGGTGGTGGAAGGTGATGCTAGAAATGTTCTCTGTGATACAGTGGAAAAGTACCATGCTTCAATATTGGTTGTGGGTAGTCATGGTTATGGAGCTATAAAAAGGGCGGTTTTAGGTAGTGTAAGTGACTATTGTGCTCATCATGCTCATTGCACTGTCATGATTGTGAAGAAGCCAAAAACCAAGCACTGA 507 0.426 MASSDQQPEKAQPVMIVAIDESEHSAYALKWTLDHFFNNNNPVFKLVLLHARPSATSSVGLAGPVYAGAAEVLPIVDSDLRKIAARVVESAKQLCVKKSVNDVIVEVVEGDARNVLCDTVEKYHASILVVGSHGYGAIKRAVLGSVSDYCAHHAHCTVMIVKKPKTKH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05297 168 Pfam Universal stress protein family 15 162 IPR006016 -
Vivi1g05297 168 PRINTS Universal stress protein signature 122 134 IPR006015 -
Vivi1g05297 168 PRINTS Universal stress protein signature 12 30 IPR006015 -
Vivi1g05297 168 PRINTS Universal stress protein signature 140 162 IPR006015 -
Vivi1g05297 168 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 10 168 - -
Vivi1g05297 168 CDD USP_Like 15 161 - -
Vivi1g05297 168 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 164 - -
Vivi1g05297 168 Gene3D HUPs 9 168 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05297 Vivi-Chr1 115738465 115739744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05297 25 163 Plant U-box Gene Family AT5G57035 25.333 4.15e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05297 - - qsa:O6P43_007167 253.447