Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05284 ATGGTCGAAACCAGACGCGGCTCTTCTTCCTCCAAGCGCCCGCTTTCTTCTCCTTCTCCTTCCAACGCCAAACGATCCAAGGTTTCGGAGGATGCTTCATCTAATCCTTTGCCCTCGATTCCCGTCAAAGAATCTGCAACTGGTAACGAATCTGGTGAACCTGAGATACAACGCTCTGATCTACCTGAAACGGCGTCGTTGAAGATTCTTGATGATGATAACAAGAAACCTCCTTCTGTGCCAATTGAAACTGATCCCGTGGTGTCCCCTCAGTGTCCAGGTGAAACGGGGGAGAAAGCAAAGGCGGTGCAGCCGCTGGTTTCTTGTCGGAAGAAACGTACGGTGGCGAAACCGATTCCTAAGGCTGCTCCGTGGGGGAAGCTTATATCTCAATCTTCTCAGAATCCTCACTTGTCCATTAGTGATCCAATCTTCACAGTTGGTCAAGGTCGTCAGAGTAATTTGACGCTTAAAGATCCTACAATTGGTAATGTTTTGTGCAAATTGAGCCACATAGAGCAACATGGAGGTTCATCAGTTGCCCTACTGGAAATCACAGGGGGCAAAGGTGTTGTTCAAGTCAATGGTAAGACTTACCGAAGGAATGCCCGGCTGATTTTAAATGGAGGTGATGAGGTGATATTTGGTTCTTCGGGAAAACAGGCTTATATCTTTCAACAGCTAAAAAGTAATAATGTTTCTACTGCTGGTATACCTCCTGTGAGTATTTTAGAAGCCCATAATGCTTCAATGAATGGGATGCAAGTTGAAGCTAGATCTGGAGACCCTTCGGATGTTGCAGGAGCATCAATATTGGCCTCTCTATCTAATATTCACAAAGATTTATCTCTCGTTTCTCCTCCAGCTAAAACATGCAAGAAACAGAATTCTGATATCTCATCACTACCTTCTGGCCATGGGGATAATGTTCCGGACAATGAAAAGAAAGATACCACCAAAAATAATGAATCGACTGGAGTTATTTCTTCTGGCAAAGCTGTTCCTGCATCCTCTACCACTGTTAATGAAAATCCTAGCCTTGACACCATGGATGTCGATGCCAATGCGGATACAAGTGTTGGGAAGATGTCTGCTACTAATTACGAATTGAGACCGTTATTGTGCATGCTTGCCGGCGGCTCAGGAACTGAATTTGATTTAAGTGGCATTCACAGGATATTAGAAGATCGAAAGGAATTAGGAGAACTCCTTAAAGGTGCTGATACAACAACAATATTGGCATCTACCAGGAGACAAGCATTTAAGGACAGTCTTGAACAGAGAATTCTCAATGCTGAGGATATTGATGTCTCTTTTGAGGCATTCCCGTATTATTTAAGTGATACAACAAAGAATGTGTTGATTGCTTCTACATATATTCATTTGAAGTGCAATGGCTTTGGAAAATATGCTTCAGATCTCCCGTCGGTGTCCCCACGGATATTGTTATCTGGTCCTTCAGGTTCGGAAATATATCAGGAGACTTTGTCCAAGGCACTTGCTAAGCATTTTGGTGCCAGGCTACTGATTGTGGATTCACTTTCGCTGCCTGGAGGAGCACCATCGAAGGAAGCTGAGTCTGCAAAAGAAAGCTCAAAGCCTGAAAAGCCTTCTGTTTTGTCTAAGAGAAGTAGCCAGGCTCCTACATTACATCATAGGAAACCCACTTCTAGTGTTGATGCGGAAATTATAGGTGGATCTACATTAAGTTCACAGGCTATGCTGAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCATTGCTCTTAAAAAAGGTGATCGGGTAAAATTTGTCGGTAACTTTCCACCCACTGTCTCGTCACTGCAAAATTTTTCTTCAAGTGGTAGAGGACCAAGTTATGGTTTCCGGGGCAAGGTTGTACTTGCTTTTGAAGACAACGAGTCTTCAAAAATTGGGGTCAGATTTGATAAATCAATTCCAGATGGCAATGACCTTGGAGGTCATATCGAAGATGATCATGGCTTCTTTTGTTCTGCAAGCCACTTACAAAGGATAGAGAGTTCAGGAGGGGACGACGACAAAGTTGCAATTAATGAAATCTTTGAGGTTGCCGCTAATCAGTGTAAAACTGGTGCACTTGTTTTGTTCATTAAAGATATTGAGAAGGCAATGGTTGGGAACAATGATGTTTTGAAAAGTAAATTTGAAACCCTACCACAAAATATTGTGGTAATTGGCTCAAATACTCAGCTGGACAGTCGTAAAGAGAAGACCCATCCTGGGGGACTTCTGTTTACAAAGTTTGGGAGCAATCAGACAGCTCTACTTGATCTTGCTTTTCCGGATAACTTTAGTAAACTACATGATAGGAGCAAAGAAAGCTCCAAAGTAACGAAGCAACTCAACCGCCTTTTCCCAAACAAAGTGACAATACAGTTGCCTCAGGATGAGGCTTTACTTTCGGATTGGAAGCAGCAGTTAGATCGTGATATTGAAACTATGAAAGCACATTCCAATGTTGTCATGCTTCGTTCGGTTCTCAAAAGAATTGGATGGGATTGTTCTGACCTTGACACTATTTGCATCAAAGATCAAACCCTGACTACTGAAAATGTGGAGAAGATCATTGGCTGGGCTATAAGTTATCATTTTATGAATTCATTTGAAACTTCTACCAAAGAAGTAAAGCGTGTGATATCTGCAGAAAGCATTAAGTATGGGCTGGACATTCTTCAGGGTGTCCAAAATGAGAACAAGAGCGTAAAGAAGTCACTGAAGGACGTGGTTACTGAGAATGAATTTGAGAAAAAGTTGCTTGGTGATGTTATTCCGCCAACTGAACTTGGAGTCACATTTGAAGATATTGGAGCTTTAGAAAATGTGAAGGACACTTTGAAGGAATTGGTCATGCTTCCTCTTAAAAGGCCTGAACTGTTTTGTAAAGGACAGCTAACTAAGCCTTGCAAGGGAATATTGCTTTTCGGCCCCCCTGGCACGGGAAAAACAATGCTCGCAAAGGCTGTAGCAACTGAAGCTGGAGCGAATTTCATAAACATTTCAATGTCCAGTATTACTTCCAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTCTCCCTAGCCAGCAAAATTGCTCCAAGTGTTATATTTGTTGATGAGGTTGATAGTATGTTAGGCAGACGTGAAAACCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTAAATTGGGATGGTCTGCGTACAAAAGAAAAAGAGCGTATACTTGTTCTTGCTGCTACAAATAGGCCTTTTGATCTTGATGAGGCTGTTATTAGGAGGCTTCCACGGAGATTGATGGTTGATTTGCCTGAAGCTCCAAATAGAGGAAAAATTCTGAGTGTCATTTTAGCGAAAGAAGATTTGGCACCCGATGTTGATTTGGAAGCAATAGCAAATATGACTGACGGATACTCTGGAAGTGACCTAAAGAATCTGTGTGTCACGGCAGCTCACTGCCCAATAAGGGAGATCTTGGAAAAGGAAAAGAAGGAAAAAAGCTTAGCATTGTCAGAGAACAAACCTGAACCTGAATTGTGTAGCAGTGCCGACATTCGTCCCTTAAAGATGGAGGATTTTAGATATGCACATGAGCAGGTGTGTGCAAGTGTGTCATCGGAGTCAACGAATATGAATGAGCTACAACAATGGAATGATCTTTATGGAGAAGGTGGATCTCGAAAAACGAGATCTTTAAGTTACTTCATGTAA 3729 0.4216 MVETRRGSSSSKRPLSSPSPSNAKRSKVSEDASSNPLPSIPVKESATGNESGEPEIQRSDLPETASLKILDDDNKKPPSVPIETDPVVSPQCPGETGEKAKAVQPLVSCRKKRTVAKPIPKAAPWGKLISQSSQNPHLSISDPIFTVGQGRQSNLTLKDPTIGNVLCKLSHIEQHGGSSVALLEITGGKGVVQVNGKTYRRNARLILNGGDEVIFGSSGKQAYIFQQLKSNNVSTAGIPPVSILEAHNASMNGMQVEARSGDPSDVAGASILASLSNIHKDLSLVSPPAKTCKKQNSDISSLPSGHGDNVPDNEKKDTTKNNESTGVISSGKAVPASSTTVNENPSLDTMDVDANADTSVGKMSATNYELRPLLCMLAGGSGTEFDLSGIHRILEDRKELGELLKGADTTTILASTRRQAFKDSLEQRILNAEDIDVSFEAFPYYLSDTTKNVLIASTYIHLKCNGFGKYASDLPSVSPRILLSGPSGSEIYQETLSKALAKHFGARLLIVDSLSLPGGAPSKEAESAKESSKPEKPSVLSKRSSQAPTLHHRKPTSSVDAEIIGGSTLSSQAMLKQEVSTASSKGIALKKGDRVKFVGNFPPTVSSLQNFSSSGRGPSYGFRGKVVLAFEDNESSKIGVRFDKSIPDGNDLGGHIEDDHGFFCSASHLQRIESSGGDDDKVAINEIFEVAANQCKTGALVLFIKDIEKAMVGNNDVLKSKFETLPQNIVVIGSNTQLDSRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSKLHDRSKESSKVTKQLNRLFPNKVTIQLPQDEALLSDWKQQLDRDIETMKAHSNVVMLRSVLKRIGWDCSDLDTICIKDQTLTTENVEKIIGWAISYHFMNSFETSTKEVKRVISAESIKYGLDILQGVQNENKSVKKSLKDVVTENEFEKKLLGDVIPPTELGVTFEDIGALENVKDTLKELVMLPLKRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKEKERILVLAATNRPFDLDEAVIRRLPRRLMVDLPEAPNRGKILSVILAKEDLAPDVDLEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKEKSLALSENKPEPELCSSADIRPLKMEDFRYAHEQVCASVSSESTNMNELQQWNDLYGEGGSRKTRSLSYFM 1242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 289 307 - -
Vivi1g05284 1242 ProSitePatterns AAA-protein family signature. 1081 1100 IPR003960 GO:0005524|GO:0016887
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 520 561 - -
Vivi1g05284 1242 Gene3D - 124 236 - -
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 65 79 - -
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 1 54 - -
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 538 553 - -
Vivi1g05284 1242 Gene3D - 936 1216 IPR027417 -
Vivi1g05284 1242 Gene3D - 1110 1204 - -
Vivi1g05284 1242 Pfam ATPase family associated with various cellular activities (AAA) 978 1107 IPR003959 GO:0005524|GO:0016887
Vivi1g05284 1242 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 419 1241 - -
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 288 351 - -
Vivi1g05284 1242 SUPERFAMILY SMAD/FHA domain 123 221 IPR008984 GO:0005515
Vivi1g05284 1242 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 936 1111 - -
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 322 351 - -
Vivi1g05284 1242 Pfam AAA+ lid domain 1131 1167 IPR041569 -
Vivi1g05284 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 937 1213 IPR027417 -
Vivi1g05284 1242 MobiDBLite consensus disorder prediction 1 99 - -
Vivi1g05284 1242 SMART AAA_5 974 1111 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05284 Vivi-Chr1 115527270 115538326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05284 973 1178 Calmodulin-binding Proteins AT3G56690 35.714 3.95e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05284 - - gmx:100801477 1856.26