Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05271 ATGTCAACAATCAAAGTGCACGGAAGCCCCTTCTCAACAGCAACCATGCGGGTTACAGCAACTCTTTATGAAAAACAGCTTGAGTTTGAGTTTGTTTACCTTAACCTCAAGATTGGTGAACACAAAAAGGAACCCTTCATATTACTCAATCCATTTGGTCAAGTTCCAGCTTTTGAACACGGAGATTTAAAGCTCTTCGAATCAAGGGCCATAACACAATATATTGAACAAGAGTACGCCGAAAAAGGGACAAAGCTAACAATCACTGACTCGAAGAAGAAGGCACTAGCCGGAGTATGGTGGGAAGTGGAGAGCCAACACTACGACCAAGTAGCAACAAAACTTGTTACAGAATTAGGGATAAAGCCATTATTTGGAAAAGCTACGGATCCAAAAGTTGTGGAAGAGAATGAAGGAAAACTGGATAGTATTCTTGATGTATATGAGAAGAGATTGTCAGAGTCAAAATACTTGGGAGGTGAGTGTTTCACATTGGTGGATCTGCATCATTTACCTTCTCTTCATTACTTGATGAAGTCACAGTGCAAGAACTTGTATGAATCAAGGCCTCATGTCAGTGCTTGGGTGGCTGATGTTACTGCAAGACCAGCTTGGGCTAAAGTTGTTGCCATGATCCCAAAATAA 645 0.4124 MSTIKVHGSPFSTATMRVTATLYEKQLEFEFVYLNLKIGEHKKEPFILLNPFGQVPAFEHGDLKLFESRAITQYIEQEYAEKGTKLTITDSKKKALAGVWWEVESQHYDQVATKLVTELGIKPLFGKATDPKVVEENEGKLDSILDVYEKRLSESKYLGGECFTLVDLHHLPSLHYLMKSQCKNLYESRPHVSAWVADVTARPAWAKVVAMIPK 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05271 214 SUPERFAMILY GST C-terminal domain-like 83 210 IPR036282 -
Vivi1g05271 214 Pfam Glutathione S-transferase, C-terminal domain 115 203 IPR004046 -
Vivi1g05271 214 FunFam Glutathione S-transferase F2 3 87 - -
Vivi1g05271 214 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 214 IPR010987 -
Vivi1g05271 214 SFLD Main.5: Phi-like 1 212 - -
Vivi1g05271 214 SUPERFAMILY Thioredoxin-like 1 83 IPR036249 -
Vivi1g05271 214 CDD GST_C_Phi 92 209 IPR034347 -
Vivi1g05271 214 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Vivi1g05271 214 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 210 - -
Vivi1g05271 214 FunFam Glutathione S-transferase F2 89 209 - -
Vivi1g05271 214 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Vivi1g05271 214 Pfam Glutathione S-transferase, N-terminal domain 3 77 IPR004045 -
Vivi1g05271 214 Gene3D Glutaredoxin 2 87 - -
Vivi1g05271 214 Gene3D - 89 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05271 Vivi-Chr1 115388084 115389261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05271 6 211 Glutathione S-transferase Gene Family AT2G47730 57.005 1.81e-85 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05271 K00799 - gmx:100799868 319.316