Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05227 ATGAAGAACAAATATTCACTAGTAGCTTGCATGATACTCTTAAGCTTCTTCCTTGGTTGTCAAGGAAGTAGCCTTAGCAAGAATTTTTACCAGCATTCCTGCCCTCAAGCCGCCGACATAATTAAGAGCAAAACCCTACAACATGTCGCTGCTAATCCCGTCTTACCTGCTAAGTTGATCAGATTGCATTTTCATGACTGTTTCGTCAGGGGTTGCGACGGCTCGGTTTTGTTGAACTCCACTGCCAATAACACTGCAGAGAAGGATGCAATTCCAAATTTAACTTTGTCTGGCTTTAATGTCATTGATGACATAAAAGACGCGATCGAGGCAAAATGTCCCAAAACTGTTTCTTGTGCTGACATATTGGCATTGGCTGCTAGGGATGCTGTTTCTGCACAATTTAACAAACCTATGTGGGAAGTACTCACCGGTAGAAGAGATGGTACAGTATCGAACCGTACCGAAGCCTTGGAGAATATCCCGAGGCCTAGCTTTAATTTCACCCAACTCAAACAAAGCTTTGCAAGTAAAGGTCTCACCCTGCATGACCTTGTTGTGTTATCAGGAGCACACACAATTGGAATAGGCCACTGCAATGCCTTCAGTAACAGGCTTTATAGTTTCACGGGAAATGGCGGTCAAGACCCTTCTTTGAATTCGACATATGCTGAATTCTTGAAGACTAAATGTAAGAATCTGACTGACAACACTACGAGGGTGGAGATGGATCCTGGAAGCTCTAGGAATTTCGACAGTGACTATTATCCTGTCCTTCTTCAGAAAAAGGGTCTGTTTCAATCAGATGCTGCTCTTATAACACAAGATCAGTCAAAAGGTATTGTTGAAGAGTTGGTTGACCAAAACAAGTTCTTCACAGAGTTTGCACAGTCGATGAAAAGGATGGGAGACATTGGTATCCTCGCAGGCTCTGCTGGGGAAATTCGGATCAAGTGTTCCGTTGTCAATTGA 972 0.4321 MKNKYSLVACMILLSFFLGCQGSSLSKNFYQHSCPQAADIIKSKTLQHVAANPVLPAKLIRLHFHDCFVRGCDGSVLLNSTANNTAEKDAIPNLTLSGFNVIDDIKDAIEAKCPKTVSCADILALAARDAVSAQFNKPMWEVLTGRRDGTVSNRTEALENIPRPSFNFTQLKQSFASKGLTLHDLVVLSGAHTIGIGHCNAFSNRLYSFTGNGGQDPSLNSTYAEFLKTKCKNLTDNTTRVEMDPGSSRNFDSDYYPVLLQKKGLFQSDAALITQDQSKGIVEELVDQNKFFTEFAQSMKRMGDIGILAGSAGEIRIKCSVVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05227 323 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Vivi1g05227 323 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Vivi1g05227 323 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 Pfam Peroxidase 48 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 Gene3D - 28 323 - -
Vivi1g05227 323 FunFam Peroxidase 28 170 - -
Vivi1g05227 323 FunFam Peroxidase 162 302 - -
Vivi1g05227 323 Gene3D Peroxidase, domain 2 162 302 - -
Vivi1g05227 323 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g05227 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vivi1g05227 323 PANTHER PEROXIDASE 25-RELATED 14 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05227 Vivi-Chr1 113571076 113572563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05227 7 323 Peroxidase AT1G05260 54.938 5.71e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05227 K00430 - gmx:100799691 521.931