Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05223 ATGATGGGTTCGAAACCGTGGCTACATCCTGCTCCAACTTATAAACCTATAGAAAGTTTTTGGGACACTGATGAAGATGCTCCCGGTCCTCGTTGTGGCCATACTCTTACCGCTGTTGCTGCTACTAAGACGCATGGTCCGCGCTTGATTCTCTTTGGTGGTGCAACTGCCATTGAAGGAGGATCCACTTCTGCTCCTGGCATTAGATTGGCTGGAGTTACGAATTCGGTTCATTCGTATGACGTTGAGACGAAAAAATGGACTAGGATTAAACCTGCCGGAGACCCGCCTTCTCCTCGTGCGGCTCATGCTGCAGCAACGGTTGGCACCATGGTTGTTTTTCAGGGTGGGATAGGTCCTGCCGGACATTCGACCGATGATCTATACGTGCTTGACTTGACCAATGATAAATACAAATGGCACAGAGTCGTTGTACAAGGGCAGGGACCGGGGCCTCGCTATGGCCATGTAATGGACTTGGTTGCTCAGAGATATCTTGTTACCGTTAGCGGAAATGATGGGAAACGAGTTGTATCTGATGCTTGGACTTTGGATACGGCTCAAAAGCCTTATGCGTGGCAGAAGCTGAACCCAGAGGGTGACAGGCCTTCTGCTAGAATGTATGCAACTGCTAGTGCCCGCTCAGATGGAATGTTTTTACTCTGCGGTGGAAGGGACTCCTCTGGAACTCCACTAGCAGACGCCTATGGACTGCTCATGCATAGGAATGGCCAGTGGGAATGGACTCTTGCACCTGGAGTTTCCCCCTCACCCAGGTACCAACATGCATCGGTTTTTGTTGGTGCACGGTTACATGTTACAGGAGGTGTTCTTAGGGGTGGGCGAGCTGTGGAAGGTGAACCATCCGTTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTGGATCGAAATGGCATTGTATCCTCATCACGCTCAAACAAAGGTCATGATTATGACCCTTCTTTGGAGCTCATGCGACGTTGTCGCCATGCAGCAGCAGCTGTTGGTGTTCGAGTCTATATCCATGGTGGTCTTAGAGGAGATACACTACTGGGTGATTTCTTAGTGGCTGAAAATTCGCCATCAGGTTCACCTTTTGATAGTCCCAAACTTAATCAGTCTAACTTAAATTATAACGGAGAAACACCAAGTTCGGATGGTGGACCAGAAACCCCATCATTTGGTGGCCCAGGCTTGGACAAATATTCTCTGGAGAAACTGAGGGAGGCATCAGCTGCTGAAGCTGAGGCAGCTAGTGCTGTCTGGCAATCTGTGCAAGCCATATCAAGTAATCCTGCCGATGAAACATCTGTGTCAGATGGCAACTCGCATGCTGCAGACACAGTTGCAGATGGAAGTGACACAGAGGGAGATGTTCACCTTCATCCTAGAGCTGTTGTAGTTGCTAAAGAGGCTATAGGTAGCCTTGGTGGAATGGTGAGACAATTGTCACTCGATCAATTTGAAAATGAAAGCAGACGCATGCTTCCCATGAACAGTGATTCCCCATATCCTACAAAAAAGTTCACCAGGCAGAAATCCCCTCAGGGTTTACATAAAAAGATAATTTCAAATTTGCTCAGGCCTCGCAACTGGAAAGCACCTGTAAATAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGCTATGCTGCTGAGCAAATATTTATGCATGAACCAACTGTTCTTCAGCTGAAAGCTCCCGTCAAAGTATTTGGTGATCTTCATGGTCAGTTTGGCGATTTGATGAGGCTATTTGATGAATATGGATTTCCTTCAACCGCAGGAGACATCACGTATATTGACTACCTATTTTTAGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTACTTGCTCTTAAGATTGAATATCCCGACAATGTTCACTTGATACGTGGAAATCATGAAGCTGCTGACATAAATGCATTATTTGGGTTTCGTATAGAGTGCATTGAACGAATGGGTGAAAATGACGGCATATGGGCGTGGACAAGATTCAATCAACTTTTTAACCATCTCCCACTCGCTGCTCTTATTGAAAAGAAAATTATATGTATGCATGGTGGCATTGGAAGATCTATCAATTCAGTAGAACAGATAGAGAAGATTGAAAGGCCCATAACAATGGATGCAGGATCTATTATTTTAATGGATCTTTTATGGTCTGATCCCACAGAAAATGATAGTGTGGAGGGTTTGAGACCAAATGCTAGAGGACCAGGGCTTGTCACTTTTGGGCCTGACCGTGTCACAGAATTCTGTAAGAAAAATAAATTACAGCTCATCATAAGGGCCCATGAGTGTGTCATGGATGGTTTTGAGCGATTTGCCCAGGGACAATTAATCACTCTTTTTTCTGCAACTAACTATTGTGGAACTGCAAACAATGCGGGAGCTATACTGGTTGTTGGCAGGGGTTTGGTTGTGGTTCCAAAATTAATTCACCCTATACCACCTCCTCTTCAGTCACCAGAGTCATCTCCTGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGTGGTCGACCACAGCCTGACCTTGACCGTGGTTCCCTAGCGTATATATGA 2622 0.4619 MMGSKPWLHPAPTYKPIESFWDTDEDAPGPRCGHTLTAVAATKTHGPRLILFGGATAIEGGSTSAPGIRLAGVTNSVHSYDVETKKWTRIKPAGDPPSPRAAHAAATVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKYKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKRVVSDAWTLDTAQKPYAWQKLNPEGDRPSARMYATASARSDGMFLLCGGRDSSGTPLADAYGLLMHRNGQWEWTLAPGVSPSPRYQHASVFVGARLHVTGGVLRGGRAVEGEPSVAVLDTAAGVWLDRNGIVSSSRSNKGHDYDPSLELMRRCRHAAAAVGVRVYIHGGLRGDTLLGDFLVAENSPSGSPFDSPKLNQSNLNYNGETPSSDGGPETPSFGGPGLDKYSLEKLREASAAEAEAASAVWQSVQAISSNPADETSVSDGNSHAADTVADGSDTEGDVHLHPRAVVVAKEAIGSLGGMVRQLSLDQFENESRRMLPMNSDSPYPTKKFTRQKSPQGLHKKIISNLLRPRNWKAPVNRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPDNVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNHLPLAALIEKKIICMHGGIGRSINSVEQIEKIERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPIPPPLQSPESSPERVMDETWMQELNIQRPPTPTRGRPQPDLDRGSLAYI 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05223 873 MobiDBLite consensus disorder prediction 848 873 - -
Vivi1g05223 873 Pfam Galactose oxidase, central domain 116 156 - -
Vivi1g05223 873 Pfam Galactose oxidase, central domain 46 106 - -
Vivi1g05223 873 FunFam Serine/threonine-protein phosphatase 507 846 - -
Vivi1g05223 873 Gene3D - 195 361 IPR015915 GO:0005515
Vivi1g05223 873 MobiDBLite consensus disorder prediction 431 449 - -
Vivi1g05223 873 SUPERFAMILY Metallo-dependent phosphatases 523 833 IPR029052 -
Vivi1g05223 873 Pfam Calcineurin-like phosphoesterase 570 777 IPR004843 GO:0016787
Vivi1g05223 873 ProSitePatterns Serine/threonine specific protein phosphatases signature. 639 644 IPR006186 GO:0016787
Vivi1g05223 873 SMART pp2a_7 542 826 IPR006186 GO:0016787
Vivi1g05223 873 FunFam Serine/threonine-protein phosphatase 10 193 - -
Vivi1g05223 873 Gene3D - 503 843 IPR029052 -
Vivi1g05223 873 Gene3D - 4 194 IPR015915 GO:0005515
Vivi1g05223 873 MobiDBLite consensus disorder prediction 361 389 - -
Vivi1g05223 873 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 398 873 - -
Vivi1g05223 873 MobiDBLite consensus disorder prediction 431 458 - -
Vivi1g05223 873 MobiDBLite consensus disorder prediction 361 401 - -
Vivi1g05223 873 PRINTS Serine/threonine phosphatase family signature 706 733 IPR006186 GO:0016787
Vivi1g05223 873 PRINTS Serine/threonine phosphatase family signature 638 662 IPR006186 GO:0016787
Vivi1g05223 873 PRINTS Serine/threonine phosphatase family signature 570 597 IPR006186 GO:0016787
Vivi1g05223 873 PRINTS Serine/threonine phosphatase family signature 766 786 IPR006186 GO:0016787
Vivi1g05223 873 PRINTS Serine/threonine phosphatase family signature 788 804 IPR006186 GO:0016787
Vivi1g05223 873 PRINTS Serine/threonine phosphatase family signature 605 632 IPR006186 GO:0016787
Vivi1g05223 873 PRINTS Serine/threonine phosphatase family signature 676 702 IPR006186 GO:0016787
Vivi1g05223 873 SUPERFAMILY Kelch motif 71 357 IPR015915 GO:0005515
Vivi1g05223 873 PIRSF STPPP_BSU1 1 873 IPR012391 GO:0004721|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05223 Vivi-Chr1 113546188 113558110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05223 571 769 Calmodulin-binding Proteins AT5G63870 33.043 2.64e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05223 K01090 - gmx:100805538 1606.65