Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05201 ATGGCTGGAAGTAATGAAGTCAACCTTAATGAATCTAAGAGTGTTGTTCCTCTTAATACTTGGGTGCTTATCTCCAATTTCAAGCTAGCTTACAATCTTCTAAGACGAGCGGATGGAACATTCAATAGAGAGTTGGCTGAGTTTCTAGACCGCAAGGTTCCGGCCAATACGATTCCTGTTGACGGAGTTTTCTCGTTTGATCATGTCGATCGGAATACAGGACTCTTCAGTAGGGTTTATCAACCTGCTCCTGAGAATGTTACTACTTGGGGCATTATAGAGCTAGAAAAGCCCTTGAGCACGACTGAGATTGTGCCTGTCATAATTTTCTTCCATGGTGGAAGCTTCTCTCATTCCTCTGCTAATAGTGCTATCTACGACACTTTCTGTCGTCGCCTTGTGAGCATGTGTAAGGCTGTTGTTGTTTCTGTAAACTACCGAAGATCGCCCGAGCATCGGTTCCCATGTGCTTATGAAGACGGTTGGAATGCTCTTAATTGGGTTAAATCAAGGACATGGCTTCAAAGTGGAAAAGATTCTAAGGTTTATGTCTACATGGCAGGGGATAGTTCCGGTGGTAACATTGCTCATCATGTCGCGGTGAGAGCTGCCGAGGAAGATGTCGAGGTACTAGGTAACATTCTTCTCCATCCGCTCTTTGGTGGGGAGAAGCGTACGGAATCAGAGAAGAAGCTCGATGGGAAGTATTTCGTAAGGTTGCAAGATCGCGATTGGTATTGGAGAGCTTTTCTACCCGAAGGAGAAGACAGAGACCATCCTGCTTGTAATCCTTTCGGACCTAATGGTAAAAGCCTCGAAGGACTCAAGTTCCCTAAAAGCCTTGTTTGTGTGGCTGGTTTGGACCTTCTACAAGATTGGCAATTGGAATATGTGGAAGGTCTCAGGAATTACAACCAAGATGTTAAACTTCTTTACCTAAAGGAAGCCACTATTGGTTTCTACTTCTTGCCTAATAATGACCATTTCTATTGCCTCATGAACGAGATAAACACCTTCGTGCATCCTAACTGTTGA 1035 0.4415 MAGSNEVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFSRVYQPAPENVTTWGIIELEKPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSMCKAVVVSVNYRRSPEHRFPCAYEDGWNALNWVKSRTWLQSGKDSKVYVYMAGDSSGGNIAHHVAVRAAEEDVEVLGNILLHPLFGGEKRTESEKKLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPNGKSLEGLKFPKSLVCVAGLDLLQDWQLEYVEGLRNYNQDVKLLYLKEATIGFYFLPNNDHFYCLMNEINTFVHPNC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05201 344 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
Vivi1g05201 344 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Vivi1g05201 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Vivi1g05201 344 SUPERFAMILY alpha/beta-Hydrolases 61 335 IPR029058 -
Vivi1g05201 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Vivi1g05201 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Vivi1g05201 344 FunFam Gibberellin receptor GID1 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05201 Vivi-Chr1 112855231 112858009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05201 1 341 Carbohydrate Esterase AT3G63010 78.363 0.0 576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05201 1 112855231 112858009 Vivi1g05201 1 112855231 112858009 ECH
Vivi6g04039 6 137860155 137861945 Vivi1g05201 1 112855231 112858009 ECH
Vivi6g04039 6 137860155 137861945 Vivi1g05201 1 112855231 112858009 PCT