Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05160 ATGGCAGAGGTGAAACTGCATGGATTTTGGTATAGTCCTTTTAATTTTAGAGTAGTATGGGCCCTAAATCTGAAGGGTATACTATATGAGCACATAGAAGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTCAATACAATCCGGTATACAAAAATATTCCAGTGCTAGTTCATGATGGAAAACCCATATGTGAGTCCATGCTCATTATTGAATACATTGATGAGATATGGCCTCAGAACTCATTGCTTCCTACTGATCCCTATGACAGAGCTCAAGCACGGTTCTGGGTTAAATATGTTGATGACATGTTTACAGCAATTGGGGCACTCCTTGATAGCAGAAGTGATGAAGAACGAGAGAAGGCCAAAGAGAGTATATGGGAGCGACTCGGAGTTGTTGAGGATCAGTGTTTGGGAGATCAGAGGAAATTCTATGGGGGAGACACCATTAACATTGTAGACATAGCTCTTGGATCTTTTGTCAAAGTTATTGATGTTCAAGAGGATATGTTTGAAGTGGTGATCTTGCAAAGTGAGAGGTTCCCACGATTGAAATTATGGTTTAATAATTTCAAGGATGTTCCAATCATCAAAGAAAACACTCCTAGTAAAGAGAAACTGGTTGCTCTTTTAAAGCCACCTACTGAAAAAAAATTGGCAAGGAAATGA 669 0.3901 MAEVKLHGFWYSPFNFRVVWALNLKGILYEHIEEDRFNKSPQLLQYNPVYKNIPVLVHDGKPICESMLIIEYIDEIWPQNSLLPTDPYDRAQARFWVKYVDDMFTAIGALLDSRSDEEREKAKESIWERLGVVEDQCLGDQRKFYGGDTINIVDIALGSFVKVIDVQEDMFEVVILQSERFPRLKLWFNNFKDVPIIKENTPSKEKLVALLKPPTEKKLARK 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05160 222 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Vivi1g05160 222 CDD GST_N_Tau 4 77 - -
Vivi1g05160 222 PRINTS Omega-class glutathione S-transferase signature 77 91 IPR005442 GO:0004364|GO:0005737
Vivi1g05160 222 PRINTS Omega-class glutathione S-transferase signature 144 163 IPR005442 GO:0004364|GO:0005737
Vivi1g05160 222 PRINTS Omega-class glutathione S-transferase signature 2 17 IPR005442 GO:0004364|GO:0005737
Vivi1g05160 222 Pfam Glutathione S-transferase, C-terminal domain 113 191 IPR004046 -
Vivi1g05160 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 215 IPR010987 -
Vivi1g05160 222 Gene3D Glutaredoxin 1 85 - -
Vivi1g05160 222 FunFam Glutathione S-transferase GSTU6 1 84 - -
Vivi1g05160 222 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vivi1g05160 222 FunFam Glutathione S-transferase U9 83 221 - -
Vivi1g05160 222 SFLD Glutathione Transferase (cytosolic) 1 218 IPR040079 -
Vivi1g05160 222 SFLD Main.3: Omega- and Tau-like 1 218 IPR045073 -
Vivi1g05160 222 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vivi1g05160 222 Gene3D - 86 221 - -
Vivi1g05160 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vivi1g05160 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 207 IPR045073 -
Vivi1g05160 222 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05160 Vivi-Chr1 112374501 112375822 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05160 4 212 Glutathione S-transferase Gene Family AT3G09270 46.948 1.26e-55 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05160 K00799 - gmx:547584 308.531