Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05159 ATGGCAGAGGTGAAACTGCACGGATTTTGGTATAGTCCTTTTACTTTTAGAGTAGTATGGGCACTAAATATGAAGAGTATACCATATGAGCACATAGAAGAAGATCGTTTCAATAAGAGTCCTCAACTTCTTCAATATAACCCTGTATACAAAAAGACTCCCGTGCTTGTTCATGATGGAAAACCCATATGTGAGTCCATGCTCATTGTTGAATACATTGATGAGATATGGCCACAGAATTCATTGCTTCCTGCTGATCCCTATGACAGAGCTCAAGCCCGGTTTTGGGTTAAATATGTTGATGACATGTTTCCAGGAATTGTGGCGCTCCAGAGTAGCAGAAACGATGAAGACCGAGAGAAGGCAAAAGAGATTATACGGGAGAGACTCGGAGTTGTTGAGGATCGGTGTCTGGGAGATGAGAGGAAATTCTATGGTGGAGATGCCATTAACATTGTAGACATAGCTCTTGCATCTTTTGTCAAATGTATTGAGGTTCAAGAGGATATGTTTGAAGTGAAGATCTTGCAAAGTGAGAAGTTCCCTCGCTTGAAATTATGGTTTAATAATTTCAAGGATGTTCCTATCATAAAAGAAAATAGTCCTAGTAAAGAGGAACTGGTGGCTTGTTTAAAGCCGCTTATTGAAAAAATCTTGGCAAAGGCAATGATGGCTTCTTGA 681 0.3994 MAEVKLHGFWYSPFTFRVVWALNMKSIPYEHIEEDRFNKSPQLLQYNPVYKKTPVLVHDGKPICESMLIVEYIDEIWPQNSLLPADPYDRAQARFWVKYVDDMFPGIVALQSSRNDEDREKAKEIIRERLGVVEDRCLGDERKFYGGDAINIVDIALASFVKCIEVQEDMFEVKILQSEKFPRLKLWFNNFKDVPIIKENSPSKEELVACLKPLIEKILAKAMMAS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05159 226 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 211 IPR010987 -
Vivi1g05159 226 Pfam Glutathione S-transferase, C-terminal domain 113 191 IPR004046 -
Vivi1g05159 226 CDD GST_N_Tau 4 77 - -
Vivi1g05159 226 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Vivi1g05159 226 Gene3D - 83 222 - -
Vivi1g05159 226 SFLD Main.3: Omega- and Tau-like 1 222 IPR045073 -
Vivi1g05159 226 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vivi1g05159 226 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vivi1g05159 226 SFLD Glutathione Transferase (cytosolic) 1 222 IPR040079 -
Vivi1g05159 226 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vivi1g05159 226 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 206 IPR045073 -
Vivi1g05159 226 FunFam Glutathione S-transferase GSTU6 1 84 - -
Vivi1g05159 226 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Vivi1g05159 226 Gene3D Glutaredoxin 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05159 Vivi-Chr1 112370832 112372071 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05159 3 218 Glutathione S-transferase Gene Family AT2G29450 42.661 5.81e-57 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05159 K00799 - gmx:547584 308.531