Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05149 ATGGAGGATGTTAAGCTTTTTGGTCTATGGTCAAGTCCATTTACTCAAAGGGTTATTTGGGCACTAAAATTAAAAGGTGTGAATTACAACTATTATGGTGAAGATCTTACAAATAAGAGCAACATGTTACTAAAATACAATCCAATCTACAAGAAAGTTCCTGTTTTTGTACACAATGAAAAACCATTAGCAGAATCAATGGTGATTGTTGAGTATATTGAGGAAACTTGGTCTAAAATACCTCTATTGCCTCAAGATGCTTATGAAAAATCCAATGTTCGTTTCTGGTCAAAGTTCATAGAGGATAAGTCAATGCAAATGATGGAATTTTTTATACATGATGGAGAAAGACAAGAGAGAGCAATAGAAGAAACTTTGGAAACTTTGAGAGTGATAGAAAATCAAAGTGGGCTTAGTGAGAAAATGTTCATTGGTGGTAACACAATTGGGATGGCAGACATAGCTTTGGGATGGGTTGCACATATTCTTCCAGTGATGGAAGAAATTGTGGGAGTCAGGTTCATCACAATTGATGCATTTCCTAATCTTCACTCTTGGGTGAAGAATTTCTTGGAAATTTCTGATATAAAAAACAATCTACCATCCCATGAGCTACTTGTTGAGTATTATAGGGAAAAGAGGAAGGTGTTTCTTGCAATGGCTTTTCATCATCATCATCATCACCATTAG 690 0.3536 MEDVKLFGLWSSPFTQRVIWALKLKGVNYNYYGEDLTNKSNMLLKYNPIYKKVPVFVHNEKPLAESMVIVEYIEETWSKIPLLPQDAYEKSNVRFWSKFIEDKSMQMMEFFIHDGERQERAIEETLETLRVIENQSGLSEKMFIGGNTIGMADIALGWVAHILPVMEEIVGVRFITIDAFPNLHSWVKNFLEISDIKNNLPSHELLVEYYREKRKVFLAMAFHHHHHHH 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05149 229 CDD GST_N_Tau 4 77 - -
Vivi1g05149 229 Gene3D - 86 221 - -
Vivi1g05149 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 217 IPR010987 -
Vivi1g05149 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 204 IPR045073 -
Vivi1g05149 229 Pfam Glutathione S-transferase, C-terminal domain 119 188 - -
Vivi1g05149 229 SFLD Main.3: Omega- and Tau-like 1 220 IPR045073 -
Vivi1g05149 229 Coils Coil 115 135 - -
Vivi1g05149 229 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Vivi1g05149 229 CDD GST_C_Tau 87 212 IPR045074 GO:0004364|GO:0006749
Vivi1g05149 229 FunFam Tau class glutathione S-transferase 83 220 - -
Vivi1g05149 229 SUPERFAMILY GST C-terminal domain-like 75 216 IPR036282 -
Vivi1g05149 229 Gene3D Glutaredoxin 1 85 - -
Vivi1g05149 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vivi1g05149 229 FunFam Tau class glutathione S-transferase 1 85 - -
Vivi1g05149 229 SFLD Main (cytGST) 1 220 - -
Vivi1g05149 229 SUPERFAMILY Thioredoxin-like 3 102 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05149 Vivi-Chr1 112202197 112203209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05149 2 213 Glutathione S-transferase Gene Family AT2G29420 43.662 8.54e-62 191