Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05145 ATGACAATAATGCCAGGCTATCCTGTCGCTGATGGTGAACTATGTAGTTTTATAAGCACCGATCAACAGCCTAGCTCTCTAGATGCTTGTGCACAATTATCTGCAGAAGAGAAACTTGCTGCAGAACAGAGTCTTTCAGTTTTTTGCAAGCCAGTAGAGTTCTACAACATTCTTCATCACCGTGCAACAATAAGCGCTGTACCACTTTTCCTTCCGAGGTGTTTCGAGTACAGGATACAGGCCAGGGACAACAAAAGGATACAAATAACAGTTTTTCTGTCATGGAGTGATGAAGAAACTCAAAACATGTTTCCGTTTTATGTCAGTCTGGCGAGACGTAATCCTAAAAATGAAGACGCTGATTATTCTACTGTTTATCTACTCAGTCAGATAGTCACCATTCGAGGTTCATCCGGCGCTGATGGGAACAGGATAATCAAAGCAGAATTTACGCTTTGTGAAGTTAATAAGTTAGCTGCGGAGGCTAATTCTGGCTCACTTTTTCTCTTGTTTTTTACCACTGAGGGAAACTCAGATTCATCATCTAGAGTCAAAGCAAGCCTGGGGCCTTCAGATCCAACTTCTCATGAATCATTAGCTGAAAAGAACTGCTTATATGGGAAAATTTCTTTTCAATCCATTTACTTGGCTTGGAAAAATTCTCCAAATTTCCGTTGGGGACAACGAGCCGAGATTAAGACTACTCTTGAACTGCTTCCATGTGTTTTGAAGTATGACTTTGTAAATAAGGGTACGACCATCGCAATCCAAGATCTATGGAATTTTGGGCTTGAGAGTACATCAAAGAGCGTTGAAATCAAAATCTTTGCTGAAGAGATCAAGGCCATGGAGAAATCTCGTAACCGCAGAAATACATTACCATCATCATCATCATCAAGATCATCATTATCTCGTGTCATTCGGTTGAAAGAAGGAAATGTGACATTTAATTACAGGTATTACAATAACAAATTGCAGAGAACAGAAGTCTCTGAAAATTTCTCCTGTCCATTCTGTTTGATTAAGTGGGGAAGCTATAAGGGTCTAAGATGTCACTTGCTCGCATCACATGATTTTTTCAAATTTGAATTTTCGGCATCGGAAGATTGTCTGGCTGTTAATGTGTCTCTGAATTTTGATATATGGAGATTTGAGCTTGTTGGAGATGGCGTTGATCCAAAATTGCAAACTTTTTTCCTTCATGGCAAGCGGATGACACACATAAGCCCAGAAAATGCATGTTTTGAAGTGGTCCAGGATGTAGACCCACCGACCTTAGCTAATAATGAAGACCCACCGGCCTTAGCTAATAATGCAGACCCACCTGCCTTAGCAATGGACGAAGACCCGCCGGCCTTAGCAATGGACGAAGACCCGCCGGTCTTAGCAATGGACGAAGACCCGCCAGTCTTAGCTATTGATGCAGACTCACCGGTTTTAGCTACGGATGCAGACCCGCCGGTATTAGCTACGGATGCAGACCCACCGGTATTAGCTACGGATGCAGACCCTCCGGTATTAGCTACGGATGCGGACCCGCCGGTATTAGCTACGGTTGCGGACCCGCCGGTTTTAGCTACGGTTGCAGACCCACCGGTCTTAACTACGGGTGCGGACCCGCCGGTATTAGCAATGGATGTGGACCCGCCGGTATTACCAATGGATGCGGACCCGCCAGTTTTAGCTATGGGTGCAAACCCACCGGTCTTAGCTGTGGGTGCAGACCCATCGGTCTTAGCTGTGGGTGCGGACCCACCGGTCTTAGCCGTGGGTGCGGACCTGCCGGTCTTAGCCGTGGATGCGGACCTGCCGGTCTTAGCCGTGGATGCGGACCAGCCTGTCCTAGCCGTAGATGCGGACCAGCCTGTCCTAGCTGTGGATGCGGACCCGTCTCTCCTAGCTAGGAATGCAGACCCACCGGTCTTAGCTATGGATGCAGACCCACTATTCTCAGAGTCGGAAACTCCTTTAGGAGATAATGAGTTTTTAAAGAAGATTGATGGAAATTCTGCAACTATATCAGGGGATGCAAAATCAAATGCAAATATTGTGCCCAATCCCAATCCAGACTGTGTCCCAATAATATCTAAGCATGGTCATGGGACTTCTGCAGGGCTGCAGATTGGCAATACAGGGAAGTTACCAGTTGAGCATTTTGACCCACAAAACATAGCCCGGTTGAAGAAGAGGCAGTTTTATCATTCTCACAAAGCTCAGGCAATGTGTCTTGATGAAGTTCTATCAAATTACGATAGTGAGGATGATGTTGATGATGAAGTTGCAGATATTGAAGAGCGGGTGAAGCTTGATCTTCAACCTTTGAGCAAAGAAGAGAAGCAATTCATGTTCATGTGGAACTCATTTATTCGGAAGCAACGTGTGCGAATAGATTCTCACATTCGTTGGGCATGTAAGGCTTTCTCAGTATTGCATGGCTCTGAGCTTGTTAAATCCCGCGAATTAACTTGGTATTGGACAATGTTCAGGATCAAATTATATAATTTGGGTCTTATAGATGGAAAAATCATCACTGATTGCAGTAATATTCTCGAACAACACGTGAAGCATAATTCAAATCCTGAGATCCCAGTAGCTAATATAAACTCCATTCATTTGTCCCCTCTTAAAAATAAAAGAAGTAAGAAGATAACACAGAAAGTGACTTCTTTATAA 2673 0.4429 MTIMPGYPVADGELCSFISTDQQPSSLDACAQLSAEEKLAAEQSLSVFCKPVEFYNILHHRATISAVPLFLPRCFEYRIQARDNKRIQITVFLSWSDEETQNMFPFYVSLARRNPKNEDADYSTVYLLSQIVTIRGSSGADGNRIIKAEFTLCEVNKLAAEANSGSLFLLFFTTEGNSDSSSRVKASLGPSDPTSHESLAEKNCLYGKISFQSIYLAWKNSPNFRWGQRAEIKTTLELLPCVLKYDFVNKGTTIAIQDLWNFGLESTSKSVEIKIFAEEIKAMEKSRNRRNTLPSSSSSRSSLSRVIRLKEGNVTFNYRYYNNKLQRTEVSENFSCPFCLIKWGSYKGLRCHLLASHDFFKFEFSASEDCLAVNVSLNFDIWRFELVGDGVDPKLQTFFLHGKRMTHISPENACFEVVQDVDPPTLANNEDPPALANNADPPALAMDEDPPALAMDEDPPVLAMDEDPPVLAIDADSPVLATDADPPVLATDADPPVLATDADPPVLATDADPPVLATVADPPVLATVADPPVLTTGADPPVLAMDVDPPVLPMDADPPVLAMGANPPVLAVGADPSVLAVGADPPVLAVGADLPVLAVDADLPVLAVDADQPVLAVDADQPVLAVDADPSLLARNADPPVLAMDADPLFSESETPLGDNEFLKKIDGNSATISGDAKSNANIVPNPNPDCVPIISKHGHGTSAGLQIGNTGKLPVEHFDPQNIARLKKRQFYHSHKAQAMCLDEVLSNYDSEDDVDDEVADIEERVKLDLQPLSKEEKQFMFMWNSFIRKQRVRIDSHIRWACKAFSVLHGSELVKSRELTWYWTMFRIKLYNLGLIDGKIITDCSNILEQHVKHNSNPEIPVANINSIHLSPLKNKRSKKITQKVTSL 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05145 890 MobiDBLite consensus disorder prediction 177 197 - -
Vivi1g05145 890 PANTHER POLYCOMB GROUP PROTEIN 32 857 - -
Vivi1g05145 890 CDD VEFS-box_EMF2-like 727 853 - -
Vivi1g05145 890 CDD ZnB-Zn_EMF2-like 308 382 - -
Vivi1g05145 890 Pfam VEFS-Box of polycomb protein 714 848 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05145 Vivi-Chr1 112144818 112162000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05145 679 852 C2H2 Transcription Factor Family AT5G51230 48.571 1.70e-36 144