Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05143 ATGACAATAATGCCAGGCTATCCTGTCGCTGATGGTGAACTATGTTTTATAAGCACCGATCAACAGCCTAGCTCTCTAGATGCTTGTGCACAATTATCTGCAGAAGAGAAACTTGCTGCAGAACAGAGTCTTTCAGTTTTTTGCAAGCCAGTAGAGTTCTACAACATTCTTCATCACCGTGCAACAATAAGCGCTGTACCACTTTTCCTTCCGAGGTGTTTCGAGTACAGGATACAGGCCAGGGACAACAAAAGGATACAAATAACAGTTTTTCTGTCATGGAGTGATGAAGAAACTCAAAACATGTTTCCGTTTTATGTCAGTCTGGCGAGACGTAATCCTAAAAATGAAGACGCTGATTATTCTACTGTTTATCTACTCAGTCAGATAGTCACCATTCGAGGTTCATCCGGCGCTGATGGGAACAGGATAATCAAAGCAGAATTTACGCTTTGTGAAGTTAATAAGTTAGCTGCGGAGGCTAATTCTGGCTCACTTTTTCTCTTGTTTTTTACCACTGAGGGAAACTCAGATTCATCATCTAGAGTCAAAGCAAGCCTGGGGCCTTCAGATCCAACTTCTCATGAATCATTAGCTGAAAAGAACTGCTTATATGGGAAAATTTCTTTTCAATCCATTTACTTGGCTTGGAAAAATTCTCCAAATTTCCGTTGGGGACAACGAGCCGAGATTAAGACTACTCTTGAACTGCTTCCATGTGTTTTGAAGTATGACTTTGTAAATAAGGGTACGACCATCGCAATCCAAGATCTATGGAATTTTGGGCTTGAGAGTACATCAAAGAGCGTTGAAATCAAAATCTTTGCTGAAGAGATCAAGGCCATGGAGAAATCTCGTAACCGCAGAAATACATTACCATCATCATCATCATCAAGATCATCATTATCTCGTGTCATTCGGTTGAAAGAAGGAAATGTGACATTTAATTACAGGTATTACAATAACAAATTGCAGAGAACAGAAGTCTCTGAAAATTTCTCCTGTCCATTCTGTTTGATTAAGTGGGGAAGCTATAAGGGTCTAAGATGTCACTTGCTCGCATCACATGATTTTTTCAAATTTGAATTTTCGGCATCGGAAGATTGTCTGGCTGTTAATGTGTCTCTGAATTTTGATATATGGAGATTTGAGCTTGTTGGAGATGGCGTTGATCCAAAATTGCAAACTTTTTTCCTTCATGGCAAGCGGATGACACACATAAGCCCAGAAAATGCATGTTTTGAAGTGGTCCAGGATGTAGACCCACCGACCTTAGCTAATAATGAAGACCCACCGGCCTTAGCTAATAATGCAGACCCACCTGCCTTAGCAATGGACGAAGACCCGCCGGCCTTAGCAATGGACGAAGACCCGCCGGTCTTAGCAATGGACGAAGACCCGCCAGTCTTAGCTATTGATGCAGACTCACCGGTTTTAGCTACGGATGCAGACCCGCCGGTATTAGCTACGGATGCAGACCCACCGGTATTAGCTACGGATGCAGACCCTCCGGTATTAGCTACGGATGCGGACCCGCCGGTATTAGCTACGGTTGCGGACCCGCCGGTTTTAGCTACGGTTGCAGACCCACCGGTCTTAACTACGGGTGCGGACCCGCCGGTATTAGCAATGGATGTGGACCCGCCGGTATTACCAATGGATGCGGACCCGCCAGTTTTAGCTATGGGTGCAAACCCACCGGTCTTAGCTGTGGGTGCAGACCCATCGGTCTTAGCTGTGGGTGCGGACCCACCGGTCTTAGCCGTGGGTGCGGACCTGCCGGTCTTAGCCGTGGATGCGGACCTGCCGGTCTTAGCCGTGGATGCGGACCAGCCTGTCCTAGCCGTAGATGCGGACCAGCCTGTCCTAGCTGTGGATGCGGACCCGTCTCTCCTAGCTAGGAATGCAGACCCACCGGTCTTAGCTATGGATGCAGACCCACTATTCTCAGAGTCGGAAACTCCTTTAGGAGATAATGAGTTTTTAAAGAAGATTGATGGAAATTCTGCAACTATATCAGGGGATGCAAAATCAAATGCAAATATTGTGCCCAATCCCAATCCAGACTGTGTCCCAATAATATCTAAGCATGGTCATGGGACTTCTGCAGGGCTGCAGATTGGCAATACAGGGAAGTTACCAGTTGAGCATTTTGACCCACAAAACATAGCCCGGTTGAAGAAGAGGCAGTTTTATCATTCTCACAAAGCTCAGGCAATGTGTCTTGATGAAGTTCTATCAAATTACGATAGTGAGGATGATGTTGATGATGAAGTTGCAGATATTGAAGAGCGGGTGAAGCTTGATCTTCAACCTTTGAGCAAAGAAGAGAAGCAATTCATGTTCATGTGGAACTCATTTATTCGGAAGCAACGTGTGCGAATAGATTCTCACATTCGTTGGGCATGTAAGGCTTTCTCAGTATTGCATGGCTCTGAGCTTGTTAAATCCCGCGAATTAACTTGGTATTGGACAATGTTCAGGATCAAATTATATAATTTGGGTCTTATAGATGGAAAAATCATCACTGATTGCAGTAATATTCTCGAACAACACGTGAAGCATAATTCAAATCCTGAGATCCCAGTAGCTAATATAAACTCCATTCATTTGTCCCCTCTTAAAAATAAAAGAAGTAAGAAGATAACACAGAAAGTGACTTCTTTATAA 2670 0.4431 MTIMPGYPVADGELCFISTDQQPSSLDACAQLSAEEKLAAEQSLSVFCKPVEFYNILHHRATISAVPLFLPRCFEYRIQARDNKRIQITVFLSWSDEETQNMFPFYVSLARRNPKNEDADYSTVYLLSQIVTIRGSSGADGNRIIKAEFTLCEVNKLAAEANSGSLFLLFFTTEGNSDSSSRVKASLGPSDPTSHESLAEKNCLYGKISFQSIYLAWKNSPNFRWGQRAEIKTTLELLPCVLKYDFVNKGTTIAIQDLWNFGLESTSKSVEIKIFAEEIKAMEKSRNRRNTLPSSSSSRSSLSRVIRLKEGNVTFNYRYYNNKLQRTEVSENFSCPFCLIKWGSYKGLRCHLLASHDFFKFEFSASEDCLAVNVSLNFDIWRFELVGDGVDPKLQTFFLHGKRMTHISPENACFEVVQDVDPPTLANNEDPPALANNADPPALAMDEDPPALAMDEDPPVLAMDEDPPVLAIDADSPVLATDADPPVLATDADPPVLATDADPPVLATDADPPVLATVADPPVLATVADPPVLTTGADPPVLAMDVDPPVLPMDADPPVLAMGANPPVLAVGADPSVLAVGADPPVLAVGADLPVLAVDADLPVLAVDADQPVLAVDADQPVLAVDADPSLLARNADPPVLAMDADPLFSESETPLGDNEFLKKIDGNSATISGDAKSNANIVPNPNPDCVPIISKHGHGTSAGLQIGNTGKLPVEHFDPQNIARLKKRQFYHSHKAQAMCLDEVLSNYDSEDDVDDEVADIEERVKLDLQPLSKEEKQFMFMWNSFIRKQRVRIDSHIRWACKAFSVLHGSELVKSRELTWYWTMFRIKLYNLGLIDGKIITDCSNILEQHVKHNSNPEIPVANINSIHLSPLKNKRSKKITQKVTSL 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05143 889 MobiDBLite consensus disorder prediction 176 195 - -
Vivi1g05143 889 CDD VEFS-box_EMF2-like 726 852 - -
Vivi1g05143 889 PANTHER POLYCOMB GROUP PROTEIN 31 856 - -
Vivi1g05143 889 Pfam VEFS-Box of polycomb protein 713 847 IPR019135 -
Vivi1g05143 889 CDD ZnB-Zn_EMF2-like 307 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05143 Vivi-Chr1 112144818 112162000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05143 678 851 C2H2 Transcription Factor Family AT5G51230 48.571 1.76e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05143 - - vvo:131643868 1689.86