Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi1g05128 | ATGGCGGGGAATTTCAGATTCATGATGGATCAGAACGATATCGTGAGGTTCTTGACTACAAGTATTGATAGTTTTATTCAAGATAGGTTAATCAATAAAGAGCAAAGAACGCAGCATAAAGATCAGTGTGCTGAGAGATTAGCAGCTGAAGATGGAAATGGTGAGAAAGAAAGTGAGGTTGAGTATTCCGATCAAGCGGTATTGGCGAACCTGGATTGGGGAATTGAAGCTCTTGAAGAAGCTATTAATACTTATAATATGGAAACTAAGCTTGCAAGATTGGATTATGCAGAGAAAATGTTGCAAGTGTGTGCAATGTTGAATCCTAAGCAGAAAACTGCTGGTGTGCCGAATTCGTATTTGTCTGCTTGGGCGCATTTGAATTTATCGTATTTGTGGAAGTTGAGGAACAATATTAAGAGTTGTATTTTTCATTCTCTTGAGATGTTTGTTGTTGATCCGTTTTTCTCTAGGATTGATTTCGCGCCTGAGTTATGGAAAAACCTGTTTCTTCCGCATATGAGTTCGATTGTTGGGTGGTATTCGGAGGAGAGACATAGGCTTATGATAGAAGTGATGCCAGAAAGTTCTGATTTTTCTTATACAGGTGATTTTGATCGAGTTTTCAATGAGTCTTTGGTGTTTTCTATGAGGCCGAATCAGCTTGAGAAATTACAGAAACTTGAGCAGCTTTATGGAGAGTCTTTAGATGAGAACACAAGGCTATATGCAAAATATTATAATGATTGTATGAACCCTGATTCTACCTCAAGCAAGAAGGTTGTTCCTATGTTGCCAATTGCTGAGCCGCCGATGACTCCTTTGCATGAGCTGAGTCGGTCGGTTCCTGATTTTGTTAAATTTGGTCCTATTTTGCCCAAGAGTTCTGGATTTTCTATGACAACGAGAAGATCTTATGATGGTTTAAATGAAACAGCCAGAGAGATTTTAACTTCCAATTCCAACCATTCAAAAGGGGAGAAATCATCCATGTGGGGTGCTAAGGAGAGCATAATTGAAGAGATTGAAGATGATTCAGATTCTGAGCATTATGATGCATCTGTAGATTCTGATAAAAACAATATTTTCTCACCTGAACCAAAGACGAGTATCAAGGACGAAGATATTGAGCCAAGAGTATATCGATCAAATCAGAAGAATCAAATGCAATCTCCTAATATCTCTCCTATGCAATCTCCAAGAACTGCTCCAAATTATTCATCTTCAAATCCTCAAATCCATAGTAAAAAAGAATCCAAGTTTTTGCGGTTACACTCTAATCGTTTTAGGGGCTCAACTATTTCTGATCACTCTCTATCATCATCTCCAGACATAAGCTCAGATCATATATTCAACGGCGACGAAGAAGAATCGGTCTTGAAAAATATTAAGAGAAAGAATGATAGTCAAACATCAAGTATGAATCAAGACAATGAGAATAGCCTGGTATTGAATGACAGTTCCATTGGTGAAAGTGATGATGGATATCAAAGTTCTGCTTCGTTTCCAAAATTAGAGAAACTGACTATTGGATCAAAACCACCCAAAGATTTTGTTTGTCCAATCACAGGTCAGATATTTAGTGATCCTGTCACACTTGAAACAGGCCAGACCTATGAGAAAAAAGCAATTCAAGAGTGGCTCGGAACAGGAAACACGACATGCCCTATTACGCGGCAGCCTCTATCTGCAAACATCTTACCGAAAACAAACTATGTTTTGAAGAGATTGATAGTATCATGGAGAGAACAGAATCCTGAACTAGCTCAAGAATTTTCAACTTCTAATACACCAAGAGGTTCTTCGTGTTCTCCCTCAGCAAAAGACATTGCAATGATTTCCACTACACAAAGAACGACTTATTCGCCAAGTCAGAAGAACAAAGAAGATTATATTAGACAAAGAAACAACAGATTTATGCGGGTTGCCGTCAGTGCATCTCCGACTAGTGTGTTATCTCAAGCTGCAGTTGAAACAATTATAAATTCCTTGACTCCTTACATCACAAGTCTGTGTACATCAGAAAACTTGCAGGAATGTGAAGAAGCTATAACCGAAATAGCAAGATTGTGGAAGGATTCAAAGACTGATCCTCAGATTCATTCTTATTTATCAAAGCCAACTGTCATAAGTGGTTTAGTAGAAATTCTCTCAGCTTCTCTGAATAGAGAAGTTCTGAGAAGATCAATTTATATTCTCTCAGAGCTGATTTTCGCAGACGAAAGTGTTGGAGAAACACTTAATAGTGTAGATTCTGATTTCGATTGCTTAGCTACTCTACTTAAGAACGGTTTGGCTGAGGCTGCACTTCTTATTTACCAACTAAGGCCTGTTTTTGCTCAGCTTTCGGAACACGAACTTATACCCTCTCTTATCCAAGTGATCCAGAACAAAAATGAGGATATAGACGATTTTCAGTTGGCTATAGACCCTAGAGCTGCCTCCATAGCAATTCTTGAGCAAATTTTAATGGGCGGAGACGAATATAACAGATCTGTTAATGCTTCAAGTGTTATCTCAGCAAACGGAATTCCAGCCATAGTAAAGTATTTGGACAGAACAGAAGGAAGAAGGTCTATCATTTCCATACTTTTGTGTTGTATGCAAGCTGAAAAAAGTTGCAAGAACTCAATAGCAAATAGAATCGAATTGTCACCTGTTCTTGAATTATTTCATGCTGGAAATGATAGCGTGCGAGGAATCTGTGTAGAATTCCTCTCAGAACTGGTTCGATTGAATAGAAGGACGTTCAGCAACCAGATATTACAGATAATCAAGGATGAAGGAGCATTCAGTACAATGCATACATTTCTTGTATATCTTCAAATGGCTCCAATGGAACATCAAATTGCTGTTGCTAGTCTTCTTCTTCAGCTTGATCTTTTGGTTGAGCCGCGAAAGATGAGCATTTACAGGGAAGAAGCTGTAGAGACACTGATAGAAGCACTTTGGCAAAAGGACTTCTCAAATAATCAAATGAAGGCTTTAGATGCTTTACTATTTCTTATTGGACATGTAACGTCCTCAGGAAAGTCATATACTGAAGCTTGGTTGCTGAAGATTGCCGGATTTGATCAACCTTACAATGTTTTAATGAAGGCCGATCAATTAGGACACTCTGACAAAGATTTGATGGAAACAATGGAGAATGAAAAGAACGCCATGAAATCTTGGCAGAAAAGAGTAGCCTCAGTACTTTGCAATCATGAAAACGGTTCAATATTTCAAGCTTTGGAAGAATGCCTAAAGAGTAACTCCTTAAAGATGGCAAAATCTTGCCTTGTTCTTGCCACATGGCTCACACACATGCTCTTTACTCTACCTGATACTGGTGTAAGAGATATTGCTCAGAAATCCCTGCTCGAGGCCCTTATAAATGTCATCCAGTCATCCAAGAACCTAGAGGAAAAGATCCTGGCTACCCTAGCTTTGAAGTCTTTCATTAGTGATCCAACTGCTCATGAAGCACTTAGAGTCTATGCTAAAAGCATCTACAGAATCTTGAGGAAGCTGAAGAAATATTCAACAGTCGCAGCTGATATTTTGAAAGCCTTACTAAACTTAAATTCTGTTGATGTGACAGAGTTGTGGAGTTGTAAAGAAGTAGTCGAGTTAGATTTGAGCTCAAATGGAGAGGTGCTTTCTTTGCTTTACCTCAATGGCCAGGTCTTAAGTGGACATGCTGATGGAACTATCAAGGTATGGGACGCAAGGAAGAGAATACCACGAGTAACTCAAGAAATTCGTGAGCACAAAAAAGCGGTTACATCTCTTTGTTCTTCAGTTGATAGACTATACAGTTCTTCCTTGGACAAAACAATCCGGGTTTGGACAATTAAACCCGACGGGATTAAATGTATAGATGTTTATGACGTTAAGGAAGCAGTGTATGAGCTAGCAGCTAATGCTAAATTGGCATGCTATGTAACTCAAGGAACAGGAGTTAAGGTTTTTAACTGGTCAGATCCTCCAAAGCTCATCAATTTCAACAAATATGTGAAATGCCTTGCTGTTGCTGGGGATAAATTGTATTGTGGTTGCTCTGGTTACAGCATACAGGAGGTTAACTTGTCCCAATATACATCAACTTCATTCTTCACTGGTACAAGAAAATTGTTGGGAAAACAAACCATACACTCCCTTCAAATTCATGGCGATTTCCTCTTTGCTTGTGGTTCTTCTGTTGATGCAACTGCGGGAAAGATATTTTCACTAACCTCCAAAATGGTGGTGGGATCACTCTCAACTGGACTCGATATCCATCGTGTAGCCATCAACAGTGACTTCATATTTGCTGGTACAAAGTTTGGCACCATTGAAGTTTGGTTAAAAGATAAGTTCACCCGGGTAGCTTCCATCAAAATGGCTGGTGGTCACACAAAAATTACATCATTAGTGTCAGATGCTGATGGCATGATGCTTTTTGTTGGTTCCTCTGATGGAAAGATCCAGGTTTGGGCTTTGGATTAA | 4470 | 0.3899 | MAGNFRFMMDQNDIVRFLTTSIDSFIQDRLINKEQRTQHKDQCAERLAAEDGNGEKESEVEYSDQAVLANLDWGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKTAGVPNSYLSAWAHLNLSYLWKLRNNIKSCIFHSLEMFVVDPFFSRIDFAPELWKNLFLPHMSSIVGWYSEERHRLMIEVMPESSDFSYTGDFDRVFNESLVFSMRPNQLEKLQKLEQLYGESLDENTRLYAKYYNDCMNPDSTSSKKVVPMLPIAEPPMTPLHELSRSVPDFVKFGPILPKSSGFSMTTRRSYDGLNETAREILTSNSNHSKGEKSSMWGAKESIIEEIEDDSDSEHYDASVDSDKNNIFSPEPKTSIKDEDIEPRVYRSNQKNQMQSPNISPMQSPRTAPNYSSSNPQIHSKKESKFLRLHSNRFRGSTISDHSLSSSPDISSDHIFNGDEEESVLKNIKRKNDSQTSSMNQDNENSLVLNDSSIGESDDGYQSSASFPKLEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQTYEKKAIQEWLGTGNTTCPITRQPLSANILPKTNYVLKRLIVSWREQNPELAQEFSTSNTPRGSSCSPSAKDIAMISTTQRTTYSPSQKNKEDYIRQRNNRFMRVAVSASPTSVLSQAAVETIINSLTPYITSLCTSENLQECEEAITEIARLWKDSKTDPQIHSYLSKPTVISGLVEILSASLNREVLRRSIYILSELIFADESVGETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSEHELIPSLIQVIQNKNEDIDDFQLAIDPRAASIAILEQILMGGDEYNRSVNASSVISANGIPAIVKYLDRTEGRRSIISILLCCMQAEKSCKNSIANRIELSPVLELFHAGNDSVRGICVEFLSELVRLNRRTFSNQILQIIKDEGAFSTMHTFLVYLQMAPMEHQIAVASLLLQLDLLVEPRKMSIYREEAVETLIEALWQKDFSNNQMKALDALLFLIGHVTSSGKSYTEAWLLKIAGFDQPYNVLMKADQLGHSDKDLMETMENEKNAMKSWQKRVASVLCNHENGSIFQALEECLKSNSLKMAKSCLVLATWLTHMLFTLPDTGVRDIAQKSLLEALINVIQSSKNLEEKILATLALKSFISDPTAHEALRVYAKSIYRILRKLKKYSTVAADILKALLNLNSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHADGTIKVWDARKRIPRVTQEIREHKKAVTSLCSSVDRLYSSSLDKTIRVWTIKPDGIKCIDVYDVKEAVYELAANAKLACYVTQGTGVKVFNWSDPPKLINFNKYVKCLAVAGDKLYCGCSGYSIQEVNLSQYTSTSFFTGTRKLLGKQTIHSLQIHGDFLFACGSSVDATAGKIFSLTSKMVVGSLSTGLDIHRVAINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDADGMMLFVGSSDGKIQVWALD | 1489 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi1g05128 | 1489 | Pfam | U-box domain | 515 | 585 | IPR003613 | GO:0004842|GO:0016567 | |
| Vivi1g05128 | 1489 | SUPERFAMILY | WD40 repeat-like | 1221 | 1488 | IPR036322 | GO:0005515 | |
| Vivi1g05128 | 1489 | Gene3D | - | 662 | 939 | IPR011989 | - | |
| Vivi1g05128 | 1489 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 1223 | 1236 | IPR001680 | GO:0005515 | |
| Vivi1g05128 | 1489 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 1455 | 1489 | - | - | |
| Vivi1g05128 | 1489 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 4 | 1488 | - | - | |
| Vivi1g05128 | 1489 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 504 | 596 | IPR013083 | - | |
| Vivi1g05128 | 1489 | SMART | WD40_4 | 1198 | 1236 | IPR001680 | GO:0005515 | |
| Vivi1g05128 | 1489 | SMART | WD40_4 | 1446 | 1487 | IPR001680 | GO:0005515 | |
| Vivi1g05128 | 1489 | SMART | WD40_4 | 1241 | 1278 | IPR001680 | GO:0005515 |
Showing 1 to 10 of 28 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vivi1g05128 | - | - | gmx:100776142 | 2413.65 |
Showing 1 to 1 of 1 entries