Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05119 ATGAAAGAGACTAATGCTCTAGGAGATTTCTTCAAGGGTAATAGAAACACAATTTCTGTGAAAAAGTATGCACTTTCGTCTGAAGAACAGAACAAGCTTATTTCTGCGATACATAAAACTCTAAATGATCACAACCATGTTATTGAGGATGACAAGCTACAGTTAGTAATAAACACAATCATGAAACATGTCTTGACTGTTGGTTCTGCCATAACATGTGAAAGCAATCAATGGTGGATTGGAGGCTTTCGTCCTTCTCAAATTCTTCAGGTTATTCTGCCTCAACTTCAACATATGTACACCCAGCAACAACTTAGTGATATTTATAATCTTGGACAATCATGCCAACAAGCAGAATATGCTCTTGCACAAGGCATGGTAAAACTCAAGCAAAATCTTGATGAAACAACAACAGCAGATGGCAAAGGGTTTCAATTGATGTATGTACCTCAACAACTAAGCTTCTTTAAACAGGCTGATAATCTTCGCCAAGAATTCTTGCATCAATTTTGTCGTCTCGTTACAATTTCTCAGCAAGCTGAATTTGTAGTTGCTCTCAAGGAACATCTGCATAATCCGCAGCCTCGGAGCTCACTTTGA 600 0.38 MKETNALGDFFKGNRNTISVKKYALSSEEQNKLISAIHKTLNDHNHVIEDDKLQLVINTIMKHVLTVGSAITCESNQWWIGGFRPSQILQVILPQLQHMYTQQQLSDIYNLGQSCQQAEYALAQGMVKLKQNLDETTTADGKGFQLMYVPQQLSFFKQADNLRQEFLHQFCRLVTISQQAEFVVALKEHLHNPQPRSSL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05119 199 ProSiteProfiles DOG1 domain profile. 4 199 IPR025422 GO:0006351|GO:0043565
Vivi1g05119 199 PANTHER TRANSCRIPTION FACTOR TGA9 74 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05119 Vivi-Chr1 111849897 111851395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05119 3 198 Calmodulin-binding Proteins AT5G10030 36.564 7.28e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05119 K14431 - psat:127098328 355.525