Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05118 ATGAAAGAGACTAATGCTCTAGGAGATTTCTTCAAGGGAAACACAATTTCTGTGAAAAAGTATGCACTTTCGTCTGAAGAACAGAACAAGCTTATTTCTGCGATACATAAAACTCTAAATGATCACAACCATGTTATTGAGGATGACAAGCTACAGTTAGTAATAAACACAATCATGAAACATGTCTTGACTGTTGGTTCTGCCATAACATGTGAAAGCAATCAATGGTGGATTGGAGGCTTTCGTCCTTCTCAAATTCTTCAGGTTATTCTGCCTCAACTTCAACATATGTACACCCAGCAACAACTTAGTGATATTTATAATCTTGGACAATCATGCCAACAAGCAGAATATGCTCTTGCACAAGGCATGGTAAAACTCAAGCAAAATCTTGATGAAACAACAACAGCAGATGGCAAAGGGTTTCAATTGATGTATGTACCTCAACAACTAAGCTTCTTTAAACAGGCTGATAATCTTCGCCAAGAATTCTTGCATCAATTTTGTCGTCTCGTTACAATTTCTCAGCAAGCTGAATTTGTAGTTGCTCTCAAGGAACATCTGCATAATCCGCAGCCTCGGAGCTCACTTTGA 594 0.3822 MKETNALGDFFKGNTISVKKYALSSEEQNKLISAIHKTLNDHNHVIEDDKLQLVINTIMKHVLTVGSAITCESNQWWIGGFRPSQILQVILPQLQHMYTQQQLSDIYNLGQSCQQAEYALAQGMVKLKQNLDETTTADGKGFQLMYVPQQLSFFKQADNLRQEFLHQFCRLVTISQQAEFVVALKEHLHNPQPRSSL 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05118 197 PANTHER TRANSCRIPTION FACTOR TGA9 71 196 - -
Vivi1g05118 197 ProSiteProfiles DOG1 domain profile. 1 197 IPR025422 GO:0006351|GO:0043565
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi1g05118 Vivi-Chr1 111849897 111851414 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05118 3 196 Calmodulin-binding Proteins AT5G10030 36.000 9.53e-28 105