Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05094 ATGGACCCTAATCAATATAATTTTCAACAATCTATGTTCCATCTCATACAAAATCAGCAAAATTCTAATCCTCAAAATTCTCAATTTCCCCCACCACCAACAAACTCTACCGTATTTTTTTCGCCACCAAACAACCCAAATATGTATTTTAGACCACCTATAAATACTCATGGGATAAATTTTTCTCATCATGAACCCGAAACACCAAATGAGTTTATGTCCGAACGTCAAGTTCCACAATTTTCAACTCAAGTTGGTGTTGAAAATATTTCAATTGATAAAGAACAAAGGCATCCAATTGTGGGAGTTGATCAAAAAGTCGATAGCTTTTGGTTAAGAATCACCGATAATTATAACCAATATCGTGGGCAGTCACGAGAAAAGCTACAAGGCCAATTAAAATCTCGATGGCATCGAATAAATGGCCTTGTTCAAAAATTTGTTGGGTGTTACAAACAATCTGTTCATGGAAAAAAAAGTGGGGCATCGGAGAAAGATATCTTAGTCAATGCACATGCTTTTTTTGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGAGGCTTTTAAAAGATGAACCTAAATGGATGGGAGCATGCACCGAAAATTCTTCAAAGAGAATAAAGAATTCTACTAGTGGTGCATACACGGCATCGCCAAACTCAGAGACACCTTCAAGTTATGAGTTTAACTCATCATCTCCAATGGAGCGTCCAATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATACAAATGCAACTGAACCTCCTTCCAGTGTTATTTCTGATACAATGAATAAAAGAATGGATTTAATGGAAAATCTAGCACGACTTAAGGAGGAAGAAAACAAATTAGTCAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAATGATACTCAGCGTGAATTTCATGAAAAACGTTGTAATAACCTAAAAGAAAAATATGGATGGTAA 999 0.3614 MDPNQYNFQQSMFHLIQNQQNSNPQNSQFPPPPTNSTVFFSPPNNPNMYFRPPINTHGINFSHHEPETPNEFMSERQVPQFSTQVGVENISIDKEQRHPIVGVDQKVDSFWLRITDNYNQYRGQSREKLQGQLKSRWHRINGLVQKFVGCYKQSVHGKKSGASEKDILVNAHAFFEQDEGAPFNLEYAWRLLKDEPKWMGACTENSSKRIKNSTSGAYTASPNSETPSSYEFNSSSPMERPMGQKAAKRKGKAKENTNATEPPSSVISDTMNKRMDLMENLARLKEEENKLVKEKMEFEAMQFIMSDTSKMNDTQREFHEKRCNNLKEKYGW 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05094 332 Pfam No apical meristem-associated C-terminal domain 182 321 IPR029466 -
Vivi1g05094 332 Coils Coil 267 301 - -
Vivi1g05094 332 MobiDBLite consensus disorder prediction 212 268 - -
Vivi1g05094 332 PANTHER - 53 328 - -
Vivi1g05094 332 MobiDBLite consensus disorder prediction 212 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05094 Vivi-Chr1 111549697 111550779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05094 97 288 Glutathione S-transferase Gene Family AT5G41240 31.000 1.75e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05094 - - vvo:131607299 589.726