Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05064 ATGAAAGAGACTAATGCTCAAGGAGAATTCTTCAAGGGAAACACACTTTCTGTGAAAAAGTATGCACTTTCGTCTGAAGAACAGAACAAGCTTATTTCTGCGATACATAAAACTCTAAATGATCACAACCATGTTATTGAGGATGACAAGCTACAGTTAGTTATAAACACAATCATGAAACATGTCTTGACTGTTGGTTCTGCCATAACATGTGAAAGCAATCATTGGTGGATTGGAGGCTTTCGTCCTTCTCAAATTCTTCAGGCTATTCTGCCTCAATTTCAACATACGTACACCCAGCAACAACTTAGTGATATTTATAATCTTGGACAATCATGTCAACAAGCAGAATATGCTCTTGCACAAGGCATGGTAAAACTCAAGCAAAATCTTGATGAAACAACAACAGCAGAAGGCAAAGGGTTTCAATTGATGTATGTACCTCAACAACTAAGCTTCTTTAAACAGGCTGATAATCTTCGCCAAGAATTCTTGCATCAATTTTGTCGTCTCGTTACAATTTCTCAGCAAGCTGAATTTGTAGTTGCTCTCAAGGAACATCTGCATAGTCCACAGCCTCGGAGCTCACTTTGA 594 0.3838 MKETNAQGEFFKGNTLSVKKYALSSEEQNKLISAIHKTLNDHNHVIEDDKLQLVINTIMKHVLTVGSAITCESNHWWIGGFRPSQILQAILPQFQHTYTQQQLSDIYNLGQSCQQAEYALAQGMVKLKQNLDETTTAEGKGFQLMYVPQQLSFFKQADNLRQEFLHQFCRLVTISQQAEFVVALKEHLHSPQPRSSL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05064 197 ProSiteProfiles DOG1 domain profile. 1 197 IPR025422 GO:0006351|GO:0043565
Vivi1g05064 197 PANTHER TRANSCRIPTION FACTOR TGA9 20 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05064 Vivi-Chr1 111017417 111018938 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05064 20 196 Calmodulin-binding Proteins AT5G10030 37.073 1.34e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05064 K14431 - psat:127098328 343.584