Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05063 ATGAAAGAGACTAATGCTCAAGGAGAATTCTTCAAGGGTAATAGAAACACACTTTCTGTGAAAAAGTATGCACTTTCGTCTGAAGAACAGAACAAGCTTATTTCTGCGATACATAAAACTCTAAATGATCACAACCATGTTATTGAGGATGACAAGCTACAGTTAGTTATAAACACAATCATGAAACATGTCTTGACTGTTGGTTCTGCCATAACATGTGAAAGCAATCATTGGTGGATTGGAGGCTTTCGTCCTTCTCAAATTCTTCAGGCTATTCTGCCTCAATTTCAACATACGTACACCCAGCAACAACTTAGTGATATTTATAATCTTGGACAATCATGTCAACAAGCAGAATATGCTCTTGCACAAGGCATGGTAAAACTCAAGCAAAATCTTGATGAAACAACAACAGCAGAAGGCAAAGGGTTTCAATTGATGTATGTACCTCAACAACTAAGCTTCTTTAAACAGGCTGATAATCTTCGCCAAGAATTCTTGCATCAATTTTGTCGTCTCGTTACAATTTCTCAGCAAGCTGAATTTGTAGTTGCTCTCAAGGAACATCTGCATAGTCCACAGCCTCGGAGCTCACTTTGA 600 0.3817 MKETNAQGEFFKGNRNTLSVKKYALSSEEQNKLISAIHKTLNDHNHVIEDDKLQLVINTIMKHVLTVGSAITCESNHWWIGGFRPSQILQAILPQFQHTYTQQQLSDIYNLGQSCQQAEYALAQGMVKLKQNLDETTTAEGKGFQLMYVPQQLSFFKQADNLRQEFLHQFCRLVTISQQAEFVVALKEHLHSPQPRSSL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05063 199 PANTHER TRANSCRIPTION FACTOR TGA9 72 198 - -
Vivi1g05063 199 ProSiteProfiles DOG1 domain profile. 4 199 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05063 Vivi-Chr1 111017417 111018947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05063 22 198 Calmodulin-binding Proteins AT5G10030 37.073 1.39e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05063 K14431 - psat:127098328 347.821