Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05050 ATGGGAATAGCAATGGTTGGAACTGATTTGCTGAGTGAAAAAGCAGCCATCATGAGAGAGTCTCTTCAAAAGAGCCAGACCATTACAGACAACGTTGTCACCATTCTCGGTTCCTTTGACCACCGTTTATCCACCCTTGAAGCTGCCATGCGTCCAACTCAGATTAGGACACATTCTATTAGGCAAGCTCATGAGAATATTGACAAGACTTTGAAGGCTGCTGAGATTATATTGTCCCACTTTGATCAGTATCGTCAGGCAGAGAACAAAATACTCAAAGGGCCACACGAAGACCTAGAAAACTATCTTGAAGCAATTGCCAAGTTGAGAAGCAACATTCAGTTTTTTGGCACTAAAAACAGTTTTAGGAATAGTGATGGTGTTGTCAGCCATGCCAGTAGTTTGCTAACAAAAGCTATTTCTAAGCTACAGGACGAGTTTAATCAGCTATTATCATCTTACAGCAAACCTGTGGAACCCGAGCGCCTCTTTGATTGTCTTCCAAACTCAATGCGACCTTCGTCAGGATCGCCTGGTCATGAGGGTGAACATAATGGCAAGTCCAATCACCATGCTGATTCTCACAACAATAATGCTGATGCTGTTGTATACACACCTCCCGTCCTTATACCACCAAGAATTTTGCCACTACTACATGATTTAGCTCAGCAAATGATTGAAGCCGGTCACCGATCACAGTTACTCAAAATATACAGGGAAGCCCGTTCTAATGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGATGATGTTCAAAAGCTACAGTGGGAGATTTTAGAAGCTAAAATCGGAAACTGGATTCATTTCATGCGAATAGCTGTGAAACTGTTGTTTGCTGGGGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCGCCGAACAATGTTTTGCCGAGGTGACTACAAACAGCGTCTCTATGCTACTTAGCTTTGGAGACGCAATAGCCAAAAGCAAGAGATCCCCAGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTGCATTCAGAGATTGATACTCTATTTAAAGGCAAAGCTTGCTCCGAAATTAGAGACGCTGCAACGGCTTTGACAAAACGGCTTGCACAAACAGCGCAGGAGACCTTTGGAGACTTTGAAGAAGCGGTTGAAAAAGATGCTACAAAGACTGCAGTAACAGACGGAACTGTTCATCCTTTGACTAGCTACGTTATTAACTATGTGAAGTTTTTGTTTGACTACCGATCCACGTTGAAGCAACTTTTCCAAGAGTTTGAAGGTGGAAATGATTCTTCCCAGCTAGCAACTGTAACAATGCGAATAATGCAAGCTTTGCAAATCAATCTAGATGGTAAATCAAAGCAGTATAAAGACCCGGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTAGAAGGTCGGAAGCCAAGGATTTGCTTGGAGATGATTGGGTACAAAGACATAGGAGGATTGTGCAGCAACATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGATTCTCCAATGCATGTCTATCCAGGGACTTGCCTCATCAGGTGGTGGTAGTAATACTGCAGGCGGTGATGGTGGAACTGGAGGTAGTAGCGGTGCTTCAAGAGCACTTGTTAAAGACAGGTTTAAGACATTCAATATTATGTTTGAGGAACTTCATCAGAAACAATCACAATGGACAGTTCCAGACAGCGAGCTGCGAGAGTCTCTCAGGCTTGCAGTTGCGGAAGTCTTGTTACCTGCGTATCGATCATTCGTGAAACGTTTTGGGCCTCTAGTCGAGAGTGGAAAGACACCTCAGAAGTACATAAAATACACTGCAGAAGATCTAGATCGAATGTTAGGCGAGTTTTTTGAAGGAAAAAACATGAGTGAAACTAAGAGGTGA 1956 0.4192 MGIAMVGTDLLSEKAAIMRESLQKSQTITDNVVTILGSFDHRLSTLEAAMRPTQIRTHSIRQAHENIDKTLKAAEIILSHFDQYRQAENKILKGPHEDLENYLEAIAKLRSNIQFFGTKNSFRNSDGVVSHASSLLTKAISKLQDEFNQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGEHNGKSNHHADSHNNNADAVVYTPPVLIPPRILPLLHDLAQQMIEAGHRSQLLKIYREARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLAEQCFAEVTTNSVSMLLSFGDAIAKSKRSPEKLFVLLDMYEIMQELHSEIDTLFKGKACSEIRDAATALTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGNDSSQLATVTMRIMQALQINLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCMSIQGLASSGGGSNTAGGDGGTGGSSGASRALVKDRFKTFNIMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKTPQKYIKYTAEDLDRMLGEFFEGKNMSETKR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05050 651 MobiDBLite consensus disorder prediction 165 198 - -
Vivi1g05050 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 643 IPR004140 GO:0000145|GO:0006887
Vivi1g05050 651 MobiDBLite consensus disorder prediction 537 556 - -
Vivi1g05050 651 Gene3D Exocyst complex component Exo70 75 651 - -
Vivi1g05050 651 Pfam Exo70 exocyst complex subunit 277 638 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi1g05050 651 SUPERFAMILY Cullin repeat-like 77 642 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05050 Vivi-Chr1 110805005 110811564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05050 9 651 EXO70 exocyst subunit family AT5G03540 73.881 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05050 K07195 - gmx:100813987 1119.76