Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05049 ATGGGAATAGCAATGGTTGGAACTGATTTGCTGAGTGAAAAAGCAGCCATCATGAGAGAGTCTCTTCAAAAGAGCCAGACCATTACAGACAACGTTGTCACCATTCTCGGTTCCTTTGACCACCGTTTATCCACCCTTGAAGCTGCCATGCGTCCAACTCAGATTAGGACACATTCTATTAGGCAAGCTCATGAGAATATTGACAAGACTTTGAAGGCTGCTGAGATTATATTGTCCCACTTTGATCAGTATCGTCAGGCAGAGAACAAAATACTCAAAGGGCCACACGAAGACCTAGAAAACTATCTTGAAGCAATTGCCAAGTTGAGAAGCAACATTCAGTTTTTTGGCACTAAAAACAGTTTTAGGAATAGTGATGGTGTTGTCAGCCATGCCAGTAGTTTGCTAACAAAAGCTATTTCTAAGCTACAGGACGAGTTTAATCAGCTATTATCATCTTACAGCAAACCTGTGGAACCCGAGCGCCTCTTTGATTGTCTTCCAAACTCAATGCGACCTTCGTCAGGATCGCCTGGTCATGAGGGTGAACATAATGGCAAGTCCAATCACCATGCTGATTCTCACAACAATAATGCTGATGCTGTTGTATACACACCTCCCGTCCTTATACCACCAAGAATTTTGCCACTACTACATGATTTAGCTCAGCAAATGATTGAAGCCGGTCACCGATCACAGTTACTCAAAATATACAGGGAAGCCCGTTCTAATGTATTGGAAGAAAGCCTCCAAAAACTTGGAGTTGAGAAACTCAACAAAGATGATGTTCAAAAGCTACAGTGGGAGATTTTAGAAGCTAAAATCGGAAACTGGATTCATTTCATGCGAATAGCTGTGAAACTGTTGTTTGCTGGGGAGAGGAAAGTTTGTGATCAGATATTTGAAGGCTTTGATTCACTCGCCGAACAATGTTTTGCCGAGGTGACTACAAACAGCGTCTCTATGCTACTTAGCTTTGGAGACGCAATAGCCAAAAGCAAGAGATCCCCAGAAAAATTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTGCATTCAGAGATTGATACTCTATTTAAAGGCAAAGCTTGCTCCGAAATTAGAGACGCTGCAACGGCTTTGACAAAACGGCTTGCACAAACAGCGCAGGAGACCTTTGGAGACTTTGAAGAAGCGGTTGAAAAAGATGCTACAAAGACTGCAGTAACAGACGGAACTGTTCATCCTTTGACTAGCTACGTTATTAACTATGTGAAGTTTTTGTTTGACTACCGATCCACGTTGAAGCAACTTTTCCAAGAGTTTGAAGGTGGAAATGATTCTTCCCAGCTAGCAACTGTAACAATGCGAATAATGCAAGCTTTGCAAATCAATCTAGATGGTAAATCAAAGCAGTATAAAGACCCGGCATTGACACATCTTTTTCTCATGAACAATATTCATTATATTGTCAGATCAGTTAGAAGGTCGGAAGCCAAGGATTTGCTTGGAGATGATTGGGTACAAAGACATAGGAGGATTGTGCAGCAACATGCAAATCAATACAAAAGAAATGCTTGGGCAAAGGTCTTTTCTAACGACTTTACAAGAATAACCGTTGTAATTCGCCATAGGAGGATCGTATTCGTACCATTGCTGAATTTTGATTCTTTTGTTTGGCAGATTCTCCAATGCATGTCTATCCAGGGACTTGCCTCATCAGGTGGTGGTAGTAATACTGCAGGCGGTGATGGTGGAACTGGAGGTAGTAGCGGTGCTTCAAGAGCACTTGTTAAAGACAGGTTTAAGACATTCAATATTATGTTTGAGGAACTTCATCAGAAACAATCACAATGGACAGTTCCAGACAGCGAGCTGCGAGAGTCTCTCAGGCTTGCAGTTGCGGAAGTCTTGTTACCTGCGTATCGATCATTCGTGAAACGTTTTGGGCCTCTAGTCGAGAGTGGAAAGACACCTCAGAAGTACATAAAATACACTGCAGAAGATCTAGATCGAATGTTAGGCGAGTTTTTTGAAGGAAAAAACATGAGTGAAACTAAGAGGTGA 2052 0.4172 MGIAMVGTDLLSEKAAIMRESLQKSQTITDNVVTILGSFDHRLSTLEAAMRPTQIRTHSIRQAHENIDKTLKAAEIILSHFDQYRQAENKILKGPHEDLENYLEAIAKLRSNIQFFGTKNSFRNSDGVVSHASSLLTKAISKLQDEFNQLLSSYSKPVEPERLFDCLPNSMRPSSGSPGHEGEHNGKSNHHADSHNNNADAVVYTPPVLIPPRILPLLHDLAQQMIEAGHRSQLLKIYREARSNVLEESLQKLGVEKLNKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLAEQCFAEVTTNSVSMLLSFGDAIAKSKRSPEKLFVLLDMYEIMQELHSEIDTLFKGKACSEIRDAATALTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGNDSSQLATVTMRIMQALQINLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKVFSNDFTRITVVIRHRRIVFVPLLNFDSFVWQILQCMSIQGLASSGGGSNTAGGDGGTGGSSGASRALVKDRFKTFNIMFEELHQKQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGPLVESGKTPQKYIKYTAEDLDRMLGEFFEGKNMSETKR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05049 683 Gene3D Exocyst complex component Exo70 75 683 - -
Vivi1g05049 683 MobiDBLite consensus disorder prediction 165 198 - -
Vivi1g05049 683 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 675 IPR004140 GO:0000145|GO:0006887
Vivi1g05049 683 Pfam Exo70 exocyst complex subunit 277 670 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi1g05049 683 SUPERFAMILY Cullin repeat-like 77 674 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05049 Vivi-Chr1 110805005 110811567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05049 9 683 EXO70 exocyst subunit family AT5G03540 70.513 0.0 974
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05049 K07195 - gmx:100813987 1103.2