Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04965 ATGGATTATGTGAGTAGTGCACTGCTCTTTTTGTTGACATGCATTGTCACATACTTTGTTGGTTCACTTTATGCAAAAAGCAAAAATTCAAACTACAAGCTTCCACCTGGACCTTCTTTTTTCACTATCATGTCAAACGTTGTTGATTTGTACAACAAGCCACAACAAACACTTGCAAATTTTGCTAAGTTTTATGGTCCTGTTATGCGTATAAACCTATGCACTGAAACCACTATAATAATCTCTTCTTCTGATATGGCCAAAGAAATTCTCCATACTCATGATTCTTTGTTCACTGATAGATCTGTTCCTCATAACACAACAACACACAACCATGACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACACCTTAGGAAAATATGTCATAATAATCTATTCTCCACCAAGACTCTTGACGCAAGTACAGAACTTAGACGTATGAAACTCAAAGATCTTCTCAATGATATGCATAAAAGCAGTTTAAATGGTGAAGCTGTTGATATTGGAAGAGCTGCTTTCAAGGTTTGCATTAATTTTTTGTCCTACACTTTTGTGTCTCAAGATTTTGTTGAGTCCTTGGATGATGAGTATAAGGATATAGTTTCCACTCTCTTGAGAGCTGTTGGAACACCAAACATCTCTGATCATTTCCCTGTGTTAAAGATTTTTGACCCACAAGGAATCAAAAGACTCACTTCTAATAATATTTCAAAGGTGTTTAAAACCTTGGAAACCATAATTGACAAACGAATGAAGTTGAGAGAAAGCGAACATTACATCTCAAACAATGACATGTTAGACACCTTGTTGGACATTTCCAAAGAAGATATTCAGAAGATGGATAAAAAGCAGATTAAACATCTATTACTTGATCTACTTGTGGCGGGAACAGATACAACAGCATATGGATTAGAAAGGGCAATGAGTGAACTAGTACGCAATCCAGAGATTATGTCAAAAGCAAAAAAAGAACTTGAGGAGGTTATTGGATTAGGAAATCCAGTTGATGAATCAGACATGGATAGGCTTCCATACTTACAAGCAGTGGTAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTGCTTCCTCGAAAAGCGAGGGTAGATGTGGAAATATCAGGATACACAATTCCAAAGGGTGCTCAAGTTTTGATAAATGAATGGGCTATTGGTAGAACAGACATATGGGAAGATGCTCATTTGTTTTCACCAGAAAGGTTTATAGGATCTGAAATTGATGTGAAAGGTCGACACATTAAACTTACACCATTTGGGAGTGGAAGACGTATATGTCCTGGATCACCATTGGCAGTGAGGATGTTGCATTTGATGTTGGGATCATTGATCAACTCATTTGATTGGAAACTTGAAAATGATATGGAGTTTAAGGACATGAATTTAGACAAATCTCTAAGAGCCATTCCGGTTGCACTAAACAAAGTGTATTGA 1470 0.368 MDYVSSALLFLLTCIVTYFVGSLYAKSKNSNYKLPPGPSFFTIMSNVVDLYNKPQQTLANFAKFYGPVMRINLCTETTIIISSSDMAKEILHTHDSLFTDRSVPHNTTTHNHDNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDASTELRRMKLKDLLNDMHKSSLNGEAVDIGRAAFKVCINFLSYTFVSQDFVESLDDEYKDIVSTLLRAVGTPNISDHFPVLKIFDPQGIKRLTSNNISKVFKTLETIIDKRMKLRESEHYISNNDMLDTLLDISKEDIQKMDKKQIKHLLLDLLVAGTDTTAYGLERAMSELVRNPEIMSKAKKELEEVIGLGNPVDESDMDRLPYLQAVVKESLRLHPPAPMLLPRKARVDVEISGYTIPKGAQVLINEWAIGRTDIWEDAHLFSPERFIGSEIDVKGRHIKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENDMEFKDMNLDKSLRAIPVALNKVY 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04965 489 CDD CYP76-like 62 482 - -
Vivi1g04965 489 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 477 - -
Vivi1g04965 489 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 SUPERFAMILY Cytochrome P450 30 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 FunFam Cytochrome P450 76C4 26 488 - -
Vivi1g04965 489 Pfam Cytochrome P450 35 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04965 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vivi1g04965 489 Gene3D Cytochrome P450 21 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04965 Vivi-Chr1 108633079 108635859 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04965 1 483 Cytochrome P450 AT2G45550 40.594 2.75e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04965 - - gmx:100800810 664.84