Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04938 ATGGGTTGTAAGCAAAGAGCAATAAGTCCTTTTGGGAGTTTTGTATCTATCTTCATTGATTTCTCGTATTTCAGAAAGATCGAGATGGATTATGTGAGTACTAGTGCACTGCTCTTTTCGTTGACATGCATTGTCACATACTTTGTTGTTTCACTTCATGCAAGAAGCAAAAATTCAAACTACAAGCTTCCACCTGGACCTTCCTTTTTCACTATCATGTCAAATGTTGTTGGATTGTACAACAAACCACAACAAACACTTGCAAAATTTGCTAAGTTTTATGGTCCTGTTATGCGTATAAACCTATGCACTGAAACCACTATAATAATCTCTTCTTCTGATATGGCCAAAGAAATTCTCCATACTCATGATTCTTTGTTCACTGATAGATCTGTTCCTCATAACACTACAATTTACAACCACGAAAATCTTAGCCTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACACCTTAGGAAAGTATGTCATAATAATCTATTCTCTACCAAAACTCTTAACGCAAGTCAAGAACTAAGACGTGTGAAACTCAAAGATCTTCTCAATGATATGCATAAAAGCAGTTTAACTGGTGAAGCTGTTGATATTGGAAGAGCTGCTTTCAAAGCTTGCATTAATTTTTTGTCGTACTCTTTTGTGTCTCAAGATTTTGTTGAGTCTTTGGATGACGAGCATAAGGATATAGTTTCCACTCTCCTGAAAGCAATTGGAACACCAAACATCTCTGATCATTTCCCTGTGTTGAAGATTCTTGACCCACAGGGCATTAAAAGACTCACTCATAATTATGTTTCAAAGGTTTTTTTTGCCTTAGATATCATAATTGACAAGCGAATGAAGTTAAGAGAAAGTGAACATTATGTCTCGAACAATGACATGTTAGACGCCTTGTTGGACATTTCCAAAGAAGATACTCAGAAAATGGACAAAAAGCAGATTAAACATCTATTACTAGATTTACTTGTGGCAGGAACAGATACAACAGCATATGGATTAGAAAGAGCACTATGCGAACTAGTACACAATCCAGAGATTATGTCAAAAGCCAAAACGGAACTTGAGGAGACTATTGGAATAGGAAATCCAGTTGATGAATCAGACATGGATAGGCTTCCATACTTACAAGCAGTGGTAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTGCTCCCTCGAAAAGCAAGGGTAGATGTGGAAATATCAGGATACACAATTCCAAAGGGTGCTCAAGTTTTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGAGGATGCTCATTTGTTTTCACCAGAGAGGTTTATAGGATCTGAAATAGATGTGAAAGGACAACACTTTAAGCTTACACCATTTGGTAGTGGAAGACGTATATGTCCAGGATCACCATTGGCAGTGAGGATGTTGCATTTGATGTTGGGATCATTGATCAACTCATTTGATTGGAAACTCGAAAATAATATGGAGTTTAAGGACATGGACATGGACAAATCTCTAAGAGCTATTCCAGTTGCACTAAACAAAGTGTATTAA 1557 0.3725 MGCKQRAISPFGSFVSIFIDFSYFRKIEMDYVSTSALLFSLTCIVTYFVVSLHARSKNSNYKLPPGPSFFTIMSNVVGLYNKPQQTLAKFAKFYGPVMRINLCTETTIIISSSDMAKEILHTHDSLFTDRSVPHNTTIYNHENLSLVFLPFSPLWQHLRKVCHNNLFSTKTLNASQELRRVKLKDLLNDMHKSSLTGEAVDIGRAAFKACINFLSYSFVSQDFVESLDDEHKDIVSTLLKAIGTPNISDHFPVLKILDPQGIKRLTHNYVSKVFFALDIIIDKRMKLRESEHYVSNNDMLDALLDISKEDTQKMDKKQIKHLLLDLLVAGTDTTAYGLERALCELVHNPEIMSKAKTELEETIGIGNPVDESDMDRLPYLQAVVKESLRLHPPAPMLLPRKARVDVEISGYTIPKGAQVLINEWAIGRTDIWEDAHLFSPERFIGSEIDVKGQHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNMEFKDMDMDKSLRAIPVALNKVY 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04938 518 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS E-class P450 group I signature 421 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vivi1g04938 518 FunFam Cytochrome P450 76C4 55 517 - -
Vivi1g04938 518 CDD CYP76-like 91 511 - -
Vivi1g04938 518 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 38 506 - -
Vivi1g04938 518 Gene3D Cytochrome P450 48 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 SUPERFAMILY Cytochrome P450 64 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04938 518 Pfam Cytochrome P450 64 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04938 Vivi-Chr1 107985715 107987966 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04938 29 512 Cytochrome P450 AT2G45550 40.594 3.79e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04938 - - gmx:100800810 664.84