Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04933 ATGGATTACATGAGTACTAGTGCAGTGCTCTTTTTGTTGACATGCATTGTCACATACTTTGTTGGTTCACTTTATGCAAAAAGCAAAAATTCAAACTACAAGCTTCCACCTGGACCTTCTTTTTTCACTATCATGTCAAACGTTGTTGATTTGTACAACAAGCCACAACAAACACTTGCAAAGTTTGCTAAATTCTATGGTCCTGTTATGCGTATAAACCTATGCACTGAAACCACTATAATAATCTCTTCTTCTGATATGGCCAAAGAGATTCTCCATACTCATGATTCTTTGTTCACTGATAGATCTGTTCCTCATAACACAACAACTCACAACCATGACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTCTGGCAACACCTTAGGAAAATATGTCATAATAATCTATTCTCCACCAAGACTCTTGACGCAAGTACAGAACTTAGACGTATGAAACTCAAAGATCTTCTCAATGATATGCATAAAAGCAGTTTAACTGGTGAAGCTGTTGATATTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCCTACACTTTTGTGTCTCAAGATTTTGTTGAGTCCTTGGATGATGAGTATAAGGATATAGTTTCCACTCTCCTAAAAGCTGTGGGAACACCAAACATCTCTGATCATTTTCCTGTGTTGAAAATTTTGGACCCACAAGGCATTAAGAAACACACTACTAATTATGTTGCAAAGGTATTTTATGCCTTAGATATCATAATAGACAAGCGAATGGAGATGAGAGAAAGTGAACATTATATTTCAAACAATGACATGTTAGACACCTTGTTGGACATTTCCAAAGAAGATAAGCAGAAGATGGATAAAAAACAAATTAAACATCTATTACTTGATTTGCTTGTGGCGGGAACAGATACAACAGCGTATGGATTAGAAAGAGCACTGAGTGAACTAGTACACAATCCAGAGATTATGTCAAAAGCCAAAAAGGAACTTGAGGAGACTATTGGGATAGGAAATCCAGTTGATGAATCAGACATGGATAGGCTTCCATACTTACAAGCAGTGGTAAAAGAGAGTTTACGTTTATACCCTCCAGCTCCAATGTTGCTTCCTCGAAAAGCAAGGGTAGATGTGGAAATATCAGGATACACAATTCCAAAGGGTGCTCAAGTTTTGATAAATGAATGGGCTATCGGTAGAACAGACATATGGGAGGATGCTCATTTGTTTTCACCAGAAAGGTTTATAGGATCAGAAATAGATGTGAAGGGACGACACTTTAAGCTTACACCATTTGGGAGTGGAAGACGTATATGTCCAGGATCACCATTGGCAGTGAGGATGTTGCATTTGATGTTGGGATCATTGATCAACTCATTTGATTGGAAACTTGAAAACAATATGGAGTTTAAGGACATGGACTTGGACAAATCTTTAAGAGCTATTCCGGTTGCACTAAACAAAGTGTATTAA 1473 0.3734 MDYMSTSAVLFLLTCIVTYFVGSLYAKSKNSNYKLPPGPSFFTIMSNVVDLYNKPQQTLAKFAKFYGPVMRINLCTETTIIISSSDMAKEILHTHDSLFTDRSVPHNTTTHNHDNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDASTELRRMKLKDLLNDMHKSSLTGEAVDIGRAAFKACINFLSYTFVSQDFVESLDDEYKDIVSTLLKAVGTPNISDHFPVLKILDPQGIKKHTTNYVAKVFYALDIIIDKRMEMRESEHYISNNDMLDTLLDISKEDKQKMDKKQIKHLLLDLLVAGTDTTAYGLERALSELVHNPEIMSKAKKELEETIGIGNPVDESDMDRLPYLQAVVKESLRLYPPAPMLLPRKARVDVEISGYTIPKGAQVLINEWAIGRTDIWEDAHLFSPERFIGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENNMEFKDMDLDKSLRAIPVALNKVY 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04933 490 Gene3D Cytochrome P450 22 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Vivi1g04933 490 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 SUPERFAMILY Cytochrome P450 36 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 CDD CYP76-like 63 483 - -
Vivi1g04933 490 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g04933 490 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 478 - -
Vivi1g04933 490 FunFam Cytochrome P450 76C4 27 489 - -
Vivi1g04933 490 Pfam Cytochrome P450 36 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04933 Vivi-Chr1 107631854 107633905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04933 1 484 Cytochrome P450 AT2G45550 40.000 1.42e-132 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04933 - - gmx:100800810 679.863