Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04887 ATGGCAAAGCAAATCGCAATGACGCTTCTCCCTTTACTTCTTCTTCTTCTTTTTACTTCAATAACAGAAATGGTGGAAGGGACTAAGAAAACACATGGAGTAACTGACAGCAACAACTCTGTAAAATTGTTTGTATTTGGAGACTCGTATGTTGACACAGGCAATTTCTTGGATTCACCAGCGTACAGACCTCCTTATGGAATGACATATCCTGGTACACCTGCTGGAAGATTCTCCGATGGTCGCGTCCTCTCTGATTACATTGCCTCATTTCTGAAAATTGAAACCCCTACACCATACTCTTTGAAGAATTCCTCAAACCTACAGTATGGAATCAACTTTGCTCATGGAGGGGTTGGTATTTTCGAAACATTAACTAAAGGACCAAACATGACTGTCCAAATTGACTCACTCGAGAATCTAATCAAACAAAATGTTTATACCAAACAAGACCTTGAATCTTCGGTCGCCCTTGTAGCCGTTTCTGGAAACGATTACACTGCTTTCATAGCAAATAATAAAAGCATTACGGAGATAAAATCTTTTACAGAAACTCTTATCAAGCAATTAACGATAAACGTTGAGCGCATTCACAATTTAGGAGTAAACAAAGTAGCAATTGGTTTATTGGAACCTATTGGATGTTTGCCTCAAATAACTGTGGTAACTTTTCATCTTAGTTGCGTTGCTCCTTTAAATTCGGTAGCCCAAAATCACAATGAAGTATTGCTTCAAACTGTAAAACAACTTAACCAACAAGTTGGAAAATCGGTTTTCGTTACACTAGACCTCTACAATGCTTTCCTTTCTACCATTGAAATGATGCAGGAAAATCAAGATGAAAACTTGAAACTGCTGAATCCATTATTAAAACCTTGTTGTAATGGAGATGGTTTTAAAAATTCTTGTGGAGTTGTGGATGATAAGGGAGAAAAGAAATATAGTTTATGTGATGAACCAGAGGCTTCATTCTTTTGGGACTATGTTCATCCTTCTCAAAATGGTTGGAATTCTGTCTACCAACAGTTGCAATCTTCTCTTGGTCAACTTATTGAAAAAATTAACATTTGA 1071 0.3697 MAKQIAMTLLPLLLLLLFTSITEMVEGTKKTHGVTDSNNSVKLFVFGDSYVDTGNFLDSPAYRPPYGMTYPGTPAGRFSDGRVLSDYIASFLKIETPTPYSLKNSSNLQYGINFAHGGVGIFETLTKGPNMTVQIDSLENLIKQNVYTKQDLESSVALVAVSGNDYTAFIANNKSITEIKSFTETLIKQLTINVERIHNLGVNKVAIGLLEPIGCLPQITVVTFHLSCVAPLNSVAQNHNEVLLQTVKQLNQQVGKSVFVTLDLYNAFLSTIEMMQENQDENLKLLNPLLKPCCNGDGFKNSCGVVDDKGEKKYSLCDEPEASFFWDYVHPSQNGWNSVYQQLQSSLGQLIEKINI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04887 356 SUPERFAMILY SGNH hydrolase 40 347 - -
Vivi1g04887 356 PANTHER OSJNBB0059K02.9 PROTEIN 8 351 - -
Vivi1g04887 356 Pfam GDSL-like Lipase/Acylhydrolase 43 336 IPR001087 GO:0016788
Vivi1g04887 356 Gene3D SGNH hydrolase 29 349 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04887 Vivi-Chr1 106207365 106210654 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04887 43 343 Pollen Coat Proteome AT1G75910 27.164 1.59e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04887 - - gmx:100790363 420.624