Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04883 ATGACGAAGCAACTTGTAATCACTCTTCTTCTTCTTTTCACTTTAATAACAACAGATGTCGTAGAAGGGACTAAGAAAACATATGGGGTATATGACAACAACAACAACAATGTAAAATTGTTTGTATTTGGAGACTCCTATGTAGATACAGGCAATTTCTTGAACTCGTCATCCTATAAAACTCCTTATGGAATGACATATCCTGGTAAACCTGCTGGAAGATTCTCTGATGGTCGTGTTCTCACGGATTACATTGCTTCGTTTCTGAAAATTGAAACCCCAACACCATATTCATTCAGAAATTCCTCAACTCCACAATCCGGAATAAACTTTGCTTATGGAGGGACAGGTGTTTTTCTAACCCATGTCAATGGACCAAACATGACTGTTCAAATCGATTCATTTGAGAACCTAATCAAACAAAATGTTTATACCAAACAAGACCTTCAATCCTCTGTTGCTCTTGTAAGCGCTTCTGGAAATGATTACCTCGCCTTTATAAAAACTGGCAACATTACGGAGATAAAATCGTTCACTACATCGCTTATCAACCAACTATTGATAAATGTTAAACGCATTCATAATTTAGGAATAAATAAAATAGCAATTGGGTTATTGGAACCTCTTGGGTGCATGCCTCCAATAACTCAGGTAACTTTTCATCTTAGTTGCGTTGATCTTCTAAATTTGGTGTCTGAAAATCACAACAAAGTCTTGCTCCAAAATGTGCTTCAACTTAAGCAACAACTTGGAAAATCAGTTGTTCTTGTTACACTAGACGTTTACAATGCTTTCCTATCTACAATTGCAACCATGCAGAAAAATCGCAAAGAAAATTCAACACTAATGAATCCATTAGAAATGTGTTGCAAGGGAGATAGTTTGGAAAATTCATGTGGAAGAGTGGATGATAAAGGGAAAAAGAAATATAGTTTGTGTGAGAATCCAGAGCTTTCATTCTTTTGGGATATAGTTCACCCTTCTCAAAATGGATGGAATGCTGTCTACAAACAATTGCAATCATCTCTTGGTCAACTTATTGATAAGAACTAA 1053 0.359 MTKQLVITLLLLFTLITTDVVEGTKKTYGVYDNNNNNVKLFVFGDSYVDTGNFLNSSSYKTPYGMTYPGKPAGRFSDGRVLTDYIASFLKIETPTPYSFRNSSTPQSGINFAYGGTGVFLTHVNGPNMTVQIDSFENLIKQNVYTKQDLQSSVALVSASGNDYLAFIKTGNITEIKSFTTSLINQLLINVKRIHNLGINKIAIGLLEPLGCMPPITQVTFHLSCVDLLNLVSENHNKVLLQNVLQLKQQLGKSVVLVTLDVYNAFLSTIATMQKNRKENSTLMNPLEMCCKGDSLENSCGRVDDKGKKKYSLCENPELSFFWDIVHPSQNGWNAVYKQLQSSLGQLIDKN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04883 350 Gene3D SGNH hydrolase 30 345 IPR036514 -
Vivi1g04883 350 PANTHER OSJNBB0059K02.9 PROTEIN 10 348 - -
Vivi1g04883 350 Pfam GDSL-like Lipase/Acylhydrolase 40 337 IPR001087 GO:0016788
Vivi1g04883 350 SUPERFAMILY SGNH hydrolase 37 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04883 Vivi-Chr1 106081100 106083812 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04883 5 339 Pollen Coat Proteome AT1G75910 27.123 1.91e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04883 - - gmx:100790363 448.743