Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04856 ATGTTAAGTCAGGGGTTCCTGCTACAATTAGTACTAAAAGATTTGGAGTTTACAAGGATGGTGCAAAATGGTCGATGGAGAACACTCGCGTCAAAATTAAAGGAAGAATCTAAACAATTAGGGAGCCTTAGAAGTGAAAGTTTGGCAAATATAATTGGTTGTTGCTATGAAGGGGATGAGAGGCTTCTAGTGGCAGAGTTTATGCCACATGAAACTCTGGCTAAGCATCTCTTTCATTGGGAGGCTGATACAAACCAGAAAATACAAATACAGGTTCCATCACATGTTCTGTTGGGTCTCTAG 303 0.4026 MLSQGFLLQLVLKDLEFTRMVQNGRWRTLASKLKEESKQLGSLRSESLANIIGCCYEGDERLLVAEFMPHETLAKHLFHWEADTNQKIQIQVPSHVLLGL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04856 100 Gene3D Transferase(Phosphotransferase) domain 1 9 100 - -
Vivi1g04856 100 SUPERFAMILY Protein kinase-like (PK-like) 26 92 IPR011009 -
Vivi1g04856 100 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 31 84 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04856 Vivi-Chr1 104920647 104924048 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04856 36 78 Receptor kinase-like Gene Family AT5G10530 48.837 4.39e-08 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Vivi1g04856 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04856 - - vvo:131643775 202.986