Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04850 ATGTCTTCTCACGATTCAGTAAGCACGGTGTTCAAATGTATGCAAAACGGAGCCGTTGATTTTCTCATTAAACTTGTTCGCAGGAATGAGCTAAGGAACTTGTGGCAGCATGTGTGGAGAAGACATACTATTAGCAAGCCTCCTCAAAATATAACATTGGCACATGATAAACTTGATGTTGCTGAAGAAAACAATACTGCAAGTAATAATTCTAGTGGTTCTGTAGCTTCCACGCAGAAAATCGAGTGCAGTGGAAAAAATAGTGAGACTCCAGCTCAAGATATGTCCCAGCTGAAGAGTTCTTCGAGTTTGAGCAATACAGACCAGGTGAAGCACGAAAATTCTACCAAATATGAATGGGAGTCTACCGAGTATAATGACGAAACAGGAGAGAAATCAGCTTTAACAGCACCTAAAGCTGCAGGGTGTGGCAAAATTTCAACAGGTTTAAGGCTAGGTCAAAGCTATGAATATAATGAAACAGAAAACCAAGATGAAGAAGGGTTAAGAACAGAGTTAGGCAAAGCCAATCCTCATGTTAATACAAAAATTCATCGACGCAATGATGAACTAGAAGAACATTCTGCTGGGGCTATTGACTTGATGGCTACTTTTGAGAATCTTCCAAAAAGCAGTTATGCAGATTGTAGTTTCAACGGTGGTAACACAGCCAAGTTAGAATATGATACACAATTGGAACTTTCATTACAAAGAGATTATCCTGGCAGCTCATCTAAACCTACCACTGAGGAAAGGCAAAAATTGAATCATTCAAATGCTTCTCCATTTTCTCGGTGA 798 0.3947 MSSHDSVSTVFKCMQNGAVDFLIKLVRRNELRNLWQHVWRRHTISKPPQNITLAHDKLDVAEENNTASNNSSGSVASTQKIECSGKNSETPAQDMSQLKSSSSLSNTDQVKHENSTKYEWESTEYNDETGEKSALTAPKAAGCGKISTGLRLGQSYEYNETENQDEEGLRTELGKANPHVNTKIHRRNDELEEHSAGAIDLMATFENLPKSSYADCSFNGGNTAKLEYDTQLELSLQRDYPGSSSKPTTEERQKLNHSNASPFSR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04850 265 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Vivi1g04850 265 SUPERFAMILY CheY-like 1 48 IPR011006 -
Vivi1g04850 265 MobiDBLite consensus disorder prediction 112 128 - -
Vivi1g04850 265 MobiDBLite consensus disorder prediction 64 111 - -
Vivi1g04850 265 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 172 IPR045279 GO:0009736
Vivi1g04850 265 MobiDBLite consensus disorder prediction 64 133 - -
Vivi1g04850 265 MobiDBLite consensus disorder prediction 235 265 - -
Vivi1g04850 265 Gene3D - 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04850 Vivi-Chr1 104562553 104568889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04850 1 106 Response Regulator Gene Family AT5G24470 41.176 2.23e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04850 K12130 - vvo:131640011 510.375