Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04784 ATGAATAATTCAGTAGTTTCAGACAACAGTTTTATTATTGAAAGTGAGGAAGAGGATGATAAGGATTATAATGATGGAAATGATTCTGATTCTTCAAATTACTCTAATGAAAATCCACCACAAAGGAAAGAAAGTTCTTATAACCCTTCTTGGCCTCAGAGTTACAGGCAATCAATTGATCTATACAGTAGTGTACCATCACCTAATATTGGATTTCTGGGAACTTCATCGTTTTCAAGATTAAGCAGTTCCTTCCTTTCGACGTCTCTAACAAGAAGGCACACTCCGGAAGCACTTCCTTCGGTCACAAAGCCTCTGATACAACAACAGATAGAAGATGAGCCGCCACAAAGACGTAGCTCTCACACCTTGCTTACCCCTTCTGCTAGAAGGTCTTCTATGCTTAAGAAAGACTCTAAGGTTTCTCATGAAGTTCCTTCTCGCCATTGCTCTTTCGGACAGGCTGTGCTTAATGGCATAAATGTTCTTTGTGGAGTTGGAATCCTTTCAACTCCTTATGCTGCTAAAGAAGGTGGATGGGTAGGACTTTCCATCTTGTTCATTTTTGGAATTCTTTCCTTTTATACCGGATTGCTCTTGCGTTCTTGCTTGGACAGTGAGCCTGGTCTTGAGACATATCCTGACATTGGCCAAGCTGCTTTTGGTACTGCTGGACGTATTGCCATTTCAATAGTATTGTACGTCGAATTATATGGCTGTTGCATTGAGTATATAATTTTGGAAGGCGACAACTTGGCTTCCTTGTTCCCAAATGCATACTTAAATTTAGGTATAATTGAGTTGAATCCGAAAACACTCTTCGCTGTGATTGCCACATTGGCTGTTCTTCCTACAGTTTGGCTCCGCGACCTTAGCGTTCTTAGTTACATTTCAGCTGGTGGAGTTATTGCATCGGTTTTAGTAGTTCTGTGCTTGTTATGGGTCGGAGTTGAAGAAGTTGGATTTCAACGCTCTGGGACAACGCTCAATCTCGCAACTCTACCTGTTGCTATTGGTCTTTACGGCTACTGTTATTCTGGACATGCTGTGTTCCCAAACATTTATACATCGATGGCAAATCCAAACCAATTCCCTGCAGTACTAGTAGCATGTTTCGGAGTTTGTAGCTTACTTTACGCTGGAGGTGCTGTTATGGGATACAGAATGTTTGGAGAAGATACACTCTCTCAATTCACTCTTAACCTGCCACAAGATTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTCACCAAGTATGCATTAACTATATCTCCCGTGGCAATGAGTCTTGAAGAGTTGATACCATCAGACCATTCCAAGTCTTACCTGTTTTCCGTTTTCATCAGAACAGGCCTTGTATTTTCCACCCTTGTTATTGGTCTCTCAGTTCCCTTTTTCGGTTTGGTAATGTCGTTGATTGGATCTTTACTTACAATGCTTGTAACTTTGATACTCCCATGTGTTTGTTACCTAAGAATCTTGCGAGGCAAAGTCACGCGATTACAGACAGGACTTTGCATTGCGATTATTATAGTAGGCGTTGTGTGTTCGTCGGTTGGAACGTACTCAGCGCTCGCGGCGATTGTTAAGAGTTTGAGTGGATGA 1620 0.4179 MNNSVVSDNSFIIESEEEDDKDYNDGNDSDSSNYSNENPPQRKESSYNPSWPQSYRQSIDLYSSVPSPNIGFLGTSSFSRLSSSFLSTSLTRRHTPEALPSVTKPLIQQQIEDEPPQRRSSHTLLTPSARRSSMLKKDSKVSHEVPSRHCSFGQAVLNGINVLCGVGILSTPYAAKEGGWVGLSILFIFGILSFYTGLLLRSCLDSEPGLETYPDIGQAAFGTAGRIAISIVLYVELYGCCIEYIILEGDNLASLFPNAYLNLGIIELNPKTLFAVIATLAVLPTVWLRDLSVLSYISAGGVIASVLVVLCLLWVGVEEVGFQRSGTTLNLATLPVAIGLYGYCYSGHAVFPNIYTSMANPNQFPAVLVACFGVCSLLYAGGAVMGYRMFGEDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYALTISPVAMSLEELIPSDHSKSYLFSVFIRTGLVFSTLVIGLSVPFFGLVMSLIGSLLTMLVTLILPCVCYLRILRGKVTRLQTGLCIAIIIVGVVCSSVGTYSALAAIVKSLSG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04784 539 PANTHER OS05G0424000 PROTEIN-RELATED 159 517 - -
Vivi1g04784 539 MobiDBLite consensus disorder prediction 1 52 - -
Vivi1g04784 539 MobiDBLite consensus disorder prediction 28 52 - -
Vivi1g04784 539 MobiDBLite consensus disorder prediction 110 132 - -
Vivi1g04784 539 MobiDBLite consensus disorder prediction 110 142 - -
Vivi1g04784 539 FunFam Amino acid transporter AVT1A 148 536 - -
Vivi1g04784 539 Pfam Transmembrane amino acid transporter protein 150 528 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04784 Vivi-Chr1 102585584 102588862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04784 3 472 Amino Acid or Auxin Permease AAAP Family AT2G39130 71.992 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04784 K15015 - gmx:100810530 856.67