Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04772 ATGTGCAAATCTAAAAAGAGCACCACCGTGGTGCAACCCACAAACAGAAACCCTAGACGAACTTCATCTTCTCCTTCGTCTTCGAATTTTCTATCTTCCAACAGTGAAGTTCCAATCACAGAATCAAGAAGCTACGTATACGGTGGAAAAGATAAAGAATGGTCCAAAACCTCTTCTTCTTCCGTTTCTAGCCACGCTTCGCTTGCAAGCCTCAAACACAATCTTCCAGAAAACCCTCACATATACCCTTTCTCTGAGATCTCAACCGCCACCGCTAACTTCTCCGCCAACCGTCTCTCATCCAACTCCTTCCGCTGTTCGCTACGTGATCGGGAGGTTGTTGTTTTCCAGCGGAAATTCCGCCGTCAGTTAGACCTTCCGGAGCTTCGTGACCGTCTCGCGATTATCTGCCGGAGCCATCATAGTAGTCTTGTTAAACTCCTCGGAGCTTCTGTTTCTGGTAACTGCATTTACCTCGTTTATGAATTTGTTCCCGGTGCTAACCTTTCTGATTGCCTTCGAAATCGCCGGAACCCTAGCTTCACCAGTCTCTCCACGTGGACCTCACGGATGCGAGTCGCCTCCGATCTTGCTCACGGTCTTGATTATGTCCACAATTCCTCCGGTTCGGGTTCTGGTTTCGTTCACAACCACATCAAAAGTTCTAGCATAATTGTTTCAGAAGAGAACTTTGGCGCTAAGATTTGTCACTTCGGTACGTCGGAGCTCTGCGGCGAGTCCGTTGGTGAGTCTTCTGAAACGGTCTCCGGCAGGAATTTGAAGAAGTCCGGTAGCCGTGGGGTGAGGTTTGAGGGGACGAGGGGGTACATGGCGCCGGAATTTCTTATAACCGGCGCGGCAACGCAGATGACGGACGTGTACGCTTTCGGCGTGGTGGTTCTGGAGCTTCTGAGCGGGGAAGAAGCGGTGAGATTTGAATTGGAAGGTAATGACGGCGGGTACAGGAGGGTGAGTGTGGTGGATACGGCGATGGAGGCCTGGAAGGAGCACGGCGGAGTGAGAAAATGGGTTGATCGGAGGCTGAGGGATTCGTTTCCGATGGATGTGGCAGAGAAAATGATTCGGGTCGGATTGGATTGTGTCGGGGAGGATCCGAAAGAAAGACCGGATATGGGTCGGGTATCCATGGAAGTATCCAAGTTGTATTTGGAGTCGAAGGAGTGGGAGGAAAAATTAGGAACTAACTTTGATTTTTCGGTTTCATTAGCCCCACGGTGA 1239 0.5036 MCKSKKSTTVVQPTNRNPRRTSSSPSSSNFLSSNSEVPITESRSYVYGGKDKEWSKTSSSSVSSHASLASLKHNLPENPHIYPFSEISTATANFSANRLSSNSFRCSLRDREVVVFQRKFRRQLDLPELRDRLAIICRSHHSSLVKLLGASVSGNCIYLVYEFVPGANLSDCLRNRRNPSFTSLSTWTSRMRVASDLAHGLDYVHNSSGSGSGFVHNHIKSSSIIVSEENFGAKICHFGTSELCGESVGESSETVSGRNLKKSGSRGVRFEGTRGYMAPEFLITGAATQMTDVYAFGVVVLELLSGEEAVRFELEGNDGGYRRVSVVDTAMEAWKEHGGVRKWVDRRLRDSFPMDVAEKMIRVGLDCVGEDPKERPDMGRVSMEVSKLYLESKEWEEKLGTNFDFSVSLAPR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04772 412 ProSiteProfiles Protein kinase domain profile. 93 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g04772 412 Gene3D Phosphorylase Kinase; domain 1 53 163 - -
Vivi1g04772 412 Gene3D Transferase(Phosphotransferase) domain 1 165 406 - -
Vivi1g04772 412 MobiDBLite consensus disorder prediction 1 36 - -
Vivi1g04772 412 Pfam Protein tyrosine and serine/threonine kinase 125 382 IPR001245 GO:0004672|GO:0006468
Vivi1g04772 412 SUPERFAMILY Protein kinase-like (PK-like) 122 385 IPR011009 -
Vivi1g04772 412 PANTHER OS09G0572100 PROTEIN 1 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04772 Vivi-Chr1 102435679 102437292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04772 77 402 Receptor kinase-like Gene Family AT1G51940 33.136 1.37e-46 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi1g04772 PK_Tyr_Ser-Thr 1.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04772 - - mtr:11414164 653.669