Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04768 ATGGATATCACAATAACATCAAAAGAAACAATCAAACCATCATTTCCTACACCAAATGAACACAAACACTTCAAACTTTGTCTATTTGATCAACTTCAATTAGTAACATATTTACCAATGGTTATGTTTTACCCCAAAAAAGAAGGCCTAACAGAAATCTCCCATTTCATTGCTCAATTAAAAAAATCACTTTCTGAAACACTAACAATTTTCTACCCTGTAGCAGGAAGAAGAAAAAACCACACATTCATCACTTGTAATGATGAAGGTGCTATTTACTTGGAAGCCAAGGTAAACCAAACCATGGTTGAATTCCTCAATCCACCTAAGCTAGAATTTCTAAACAAATTGCTTCCATGCGAGCCTAATAAAATGCATCAAAATATTGGAGAAGAAGAAGATTTACCACAAGTACTTGTTCAAGTTAACATATTCAATTGTGGTGGAGTAGCTATAGGTACTTGTAACCTCCATACCCTCCTCGACGGTTGTTCCGGAAGCCTCTTCCAAACTACATGGGCTGCCATTTGTCGTGGCCGCTCAATCGACGAATTGCCTTGCCCCGATTTCCTTTCCGCTTCTTCCTTCTTTCCTCCTAATGATAACTTAATTTTGCATGATCATGTTGGTAAGAATGATAACGAGGTTCAAAAGAAATGTAGCACAAGAAGATTCGTGTTTGGTTTAGAAGCGATCAACGCTCTACGAGCTAAAGTAAAAGACGACGATTATATTGATAGTGATAATGAAAATGATCATGAAAGATCTAAGTCTCCTACAAGATATGAAGTATTGGCTGGTTTTATTTGGAAACACATGACACTAGCATGTAAAATGGAGGGAGGTGTAGATAGCAAAAGACCAGCATTGGCTATACATGTTGTGGACATGAGGAGAAGGATGGGTGAGCCATTTTCTAAATACACTATAGGCAACATTTTGTGGCCAGTGATGGTGTTTTGTGAAGAAGTTAATGAAGAAAGTGATATTAAATATTTGGTTAGAATATGTAAGGAGAAATTTGGGAAGGTTTCAAGGGAATTGTTTATAAGAGTGAAGAATGATACAAGTATGCTAGGGAGCAATGAATGTGTGGATTTGCCACAAGGTGTTGAGACAAAGTGTCCAATTCCAGTTGTTTTGACAAGCTGGTGTGGTTTGAATTTCAGTGAGCTTGATTTTGGTTGGGGGAAGCCTTATTGGGTTGGTGTTAGAGGTGGTGATCAAGAAACACTTCCTAATGTGGCTGTTATTATGGAAACAGATGAAGGAATGGAAGCTTGGTTGACAATGGAAATGGAACATATAGGTAATTTGGAAAATGATATGGAGTTTCTTAGATTAGCTTTGCCTAATCCTAGTGTTTCAAATATTTAG 1377 0.3725 MDITITSKETIKPSFPTPNEHKHFKLCLFDQLQLVTYLPMVMFYPKKEGLTEISHFIAQLKKSLSETLTIFYPVAGRRKNHTFITCNDEGAIYLEAKVNQTMVEFLNPPKLEFLNKLLPCEPNKMHQNIGEEEDLPQVLVQVNIFNCGGVAIGTCNLHTLLDGCSGSLFQTTWAAICRGRSIDELPCPDFLSASSFFPPNDNLILHDHVGKNDNEVQKKCSTRRFVFGLEAINALRAKVKDDDYIDSDNENDHERSKSPTRYEVLAGFIWKHMTLACKMEGGVDSKRPALAIHVVDMRRRMGEPFSKYTIGNILWPVMVFCEEVNEESDIKYLVRICKEKFGKVSRELFIRVKNDTSMLGSNECVDLPQGVETKCPIPVVLTSWCGLNFSELDFGWGKPYWVGVRGGDQETLPNVAVIMETDEGMEAWLTMEMEHIGNLENDMEFLRLALPNPSVSNI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04768 458 Gene3D - 217 448 IPR023213 -
Vivi1g04768 458 Gene3D - 1 208 IPR023213 -
Vivi1g04768 458 Pfam Transferase family 1 445 - -
Vivi1g04768 458 PANTHER F21J9.9 4 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04768 Vivi-Chr1 102284372 102285748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04768 1 440 Monolignol Biosynthesis Gene Families AT5G48930 24.628 1.02e-21 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04768 - K13065 gmx:102668997 703.36