Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04732 ATGGAGAATAATGGTCGAGTATGCACCATTTGTAATAAGTTCTTTTCTAATGGTAAGGCTTTGGGAGGCCACATAAAGTCTCACTATTCCAAATTGTCAATCCCTCCAAAACCTCCATTAAATAGCCAAGCTCCTGAATATTCAGTAGGGTCAACCCAACATCCAAATCACTTTATCACTACATCTTGTGTCTCAATTGCCAATACAAGAAATAACTCTATACACAATCTTAGATCTCTGAAAAGAAATTGTTATTACAACCTAGAAAACTTTGGTAGGAAACATGTGTTTGAGTTTTATCCAAAAAACCCAACTGGAAAAAGATCGAAATGCAGTCGTAGACAATTCAATGTGGCTGGAGAAAAAGAAAAGAATACCCAATTTAGTGTAGCTGAAGAAAGAGAAGAGAATGCACAATTTAATGTGGCTGAAGAAAATGAAGAGAGTTCACAATTTCAATTAGTGTATGATGATTTTGATATGGAAGCTGCTAAAACATTGGTTATTATTTGTGCGAAAGAATGGCAACAAATCGAGGAGAAATACTATCAAAAGAAGGCAAAAAAATTGTGA 573 0.3473 MENNGRVCTICNKFFSNGKALGGHIKSHYSKLSIPPKPPLNSQAPEYSVGSTQHPNHFITTSCVSIANTRNNSIHNLRSLKRNCYYNLENFGRKHVFEFYPKNPTGKRSKCSRRQFNVAGEKEKNTQFSVAEEREENAQFNVAEENEESSQFQLVYDDFDMEAAKTLVIICAKEWQQIEEKYYQKKAKKL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04732 190 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 33 IPR013087 -
Vivi1g04732 190 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 144 IPR044303 GO:0006355
Vivi1g04732 190 Pfam C2H2-type zinc finger 7 30 - -
Vivi1g04732 190 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04732 Vivi-Chr1 101287253 101287825 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vivi1g04732 zf-C2H2_6 2.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04732 - - vvo:131622706 335.88