Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04726 ATGAGTTATTATTATTCCATATTCTGTGTTGTTTTGTTTCTATCCATTGGAATTTCTTTGGCTTCTTCAATTGAAGATCAAAAGAGAGATAAGATAAGTAGATTACCAGGGCAACCAGAGAATGTTGGATTTGAACAGTATTCAGGTTATGTGACTGTGAATGAACAGAATGGAAGAGCACTGTTTTACTGGTTGACTGAAGCTCCGCTGAGCCGGGAGCCTAATTCTAGGCCACTGGTTTTGTGGCTCAATGGTGGTCCTGGTTGTTCTTCTATTGCGTACGGTGCTTCTGAGGAAATTGGCCCTTTTCATATTAAGTCTGATGGCAAATCACTTTACTTGAATCCTTATGCTTGGAACAATTTGGCAAACATTCTGTTCCTTGAGTCTACTGCTGGTGTTGGTTTTTCTTACTGTAATAAAACAGAAGATATGCACACATTTGGCGACCAGAAAACAGCGGAAGATGCATATATTTTTCTTGTTAATTGGTTTGAAAGATTTCCTCAATATAAGCATAGAGAATTCTACATGGTCGGCGAAAGTTATGCAGGTCATTATGTTCCTCAACTGGCTCAAATTGTTAACCAGCGAAATAAGGGAATCGTTTATCCAATTATAAATTTTAAGGGATTTATGGTTGGAAATGGTGTGACTGATGATTATCATGATTACGTTGGTACATTCGAGTACTGGTGGACACATGGTTTGATTTCAGATTCCACGTATAAGATGCTAAGAACTGCCTGTGATTTGGGGTCCTTGCAGCATCCATCAGCACAATGTTTGCATGCTCTTACAGTGGCACAATCTGAGCAAGGAGAAATTGATGGATATAGCATTAATACACCACCTTGTAACGAAACATCATTATCGCTTAGACGCGGCGTGAACGGTCGTTATCCATGGATGTATAAAGCATATGATCCATGTACTGAAAGGTATTCGGATGTGTATTTCAATCGTCCAGAAGTTCAGAAGGCCTTTCATGCCAATGTAACAGGAATTTCCTATGCATGGAAGGCGTGCAGTCATGTTCTTTGGAATTATTGGTCTGATTCTCCATTGTCCATGCTTCCTATATATCAAGAACTTATTAACGACGGTCTCCGAATATGGGTATACAGTGGAGACACTGATGCTGTACTTCCACTCACTGCAACTCGATATTCTATTGCTGCTTTGAAGCTACCAACCATCATCAATTGGTACCCTTGGTATGATAATGGCCGGGTTTGTGGATGGAGCCAAGTTTATAAAGGACTCACATTCGTGACAGTAAGAGGCGCTGGACACGAGGTTCCTCTTCATAAGCCGCACGAAGCGTTTATTCTTTTTAGATCATTCTTGGAGAACAAGCATATGCCATCATCAAGTTAA 1380 0.4029 MSYYYSIFCVVLFLSIGISLASSIEDQKRDKISRLPGQPENVGFEQYSGYVTVNEQNGRALFYWLTEAPLSREPNSRPLVLWLNGGPGCSSIAYGASEEIGPFHIKSDGKSLYLNPYAWNNLANILFLESTAGVGFSYCNKTEDMHTFGDQKTAEDAYIFLVNWFERFPQYKHREFYMVGESYAGHYVPQLAQIVNQRNKGIVYPIINFKGFMVGNGVTDDYHDYVGTFEYWWTHGLISDSTYKMLRTACDLGSLQHPSAQCLHALTVAQSEQGEIDGYSINTPPCNETSLSLRRGVNGRYPWMYKAYDPCTERYSDVYFNRPEVQKAFHANVTGISYAWKACSHVLWNYWSDSPLSMLPIYQELINDGLRIWVYSGDTDAVLPLTATRYSIAALKLPTIINWYPWYDNGRVCGWSQVYKGLTFVTVRGAGHEVPLHKPHEAFILFRSFLENKHMPSSS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04726 459 FunFam Carboxypeptidase 358 452 - -
Vivi1g04726 459 FunFam Carboxypeptidase 26 288 - -
Vivi1g04726 459 SUPERFAMILY alpha/beta-Hydrolases 28 455 IPR029058 -
Vivi1g04726 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Vivi1g04726 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Vivi1g04726 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Vivi1g04726 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185|GO:0006508
Vivi1g04726 459 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Vivi1g04726 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 439 IPR001563 GO:0004185|GO:0006508
Vivi1g04726 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 422 439 IPR033124 GO:0004185
Vivi1g04726 459 Gene3D - 358 451 - -
Vivi1g04726 459 Gene3D alpha/beta hydrolase 26 288 IPR029058 -
Vivi1g04726 459 Pfam Serine carboxypeptidase 36 452 IPR001563 GO:0004185|GO:0006508
Vivi1g04726 459 Gene3D - 311 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04726 Vivi-Chr1 101219636 101222308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04726 321 453 Calmodulin-binding Proteins AT2G22960 29.851 1.44e-14 70.1