Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g04708 ATGGGGAGGAAAGGGAATTGGTTTTCTTCTGTTAAGAAAATCTTCATATCTGATTCCAAGAAAGATCAGAAACCTCATCATCACCATAAGTCAAAGTTAACATGTTTTGGACATCATCATGAACATTATGTGGATCCTGAATTGGAATCTAGAGAAGTTGTTTCTGTTCCATCTCTTCCTAGAAGAAAACATGCTGTTAAACCGAAAAACACCGCGGCAGAAGATGAACACAACAAACAAGCATTATCCTTAGTTTTAGCCACGGCCGTTGCTACAGGCGCGGCCGTGGCTGCTGCTCAGGCCACTCGTCGCGCTAGTACCCCTCCTTGTTATGTTGGAAAAACAGCTCAAGAAATATCCGCCATGAAAATTCAATCCGCCTTTCGCGGATATTTGGCGAGGAGGATTTTGCGCGGATTGAGAGGCTTGGCGAGGTTGAAAGCATTGATGAAAGGGCAATCTGTTCAACGACAGGCGGCTACTACATTGCAATGTATGCAAACACTTTCGCGGTTGCAGTCTCAAGTTAGCGCGAGGAAGGTTAGAATGTCGGAAGAGAATCAATCTTTCCAACGCCAGTTGCAACAGAAACGCGAAAAGGAGCTTGACAAGTTACAAGCTGCGCCTATTGAAGAATGGGATTATAGTAAGAAATCGAAGGAGCAAATTCAAGCGAAATTGTTGCATAGACAAATCGCGGCTATGAGAAGAGAAAAGGCTTTGGCCTATGCATCAACACATCAACAAACATGGAGGAACACTTCAAAAGAATCGGCGGACGCGACTATTATGGATCCAACCAATCCTCATTGGGGATGGAACTGGCTTGACAGATGGATGGACTCAAGGCCCTGGGAAGGACAAAACACAAAGGATGAAAATAATCATAAATCAGCAAAAGGTGCTGCGAGTCACACTATGTCAGTTGGAGAAATCTCTAAATTGTATGCTCTAAGAGATCAAAATCAAAATCAGGATAATAAAACCTCTCCTACAAGCCAAAAACCAATTCCTCAAAATCTAGCTTCAAGGAACATACCTTCAACACCTATTAAAGGAAGAGCAAAAACCTCATCAACTGGCTCTTGGGGTGGTGATGGTGATTCAAAGTCCATGTTCAACAAGACCTCAGAAAGCAAGCGAAGACATAGCATTTCGGTATCTCCGGAGAAAGAAGACGAAAGCCTTGTAAACACACCTGGAAAGTTTACAATGGCTAAAAACAAAGTGCAAAGTACTTCTGCAAAGAAGCAGCTTTCTTCCCTAGCTTCTGGTTCTGGTACAAGAAGGCATTCTGTTCCAAGTAAAATTGGAATGAATTCTAATAAGAATGGTGTGGCTACTATTCCTGAAGGGAAAGTGAAAGTGAGAAATGGAGGGAACAGGTAG 1389 0.4284 MGRKGNWFSSVKKIFISDSKKDQKPHHHHKSKLTCFGHHHEHYVDPELESREVVSVPSLPRRKHAVKPKNTAAEDEHNKQALSLVLATAVATGAAVAAAQATRRASTPPCYVGKTAQEISAMKIQSAFRGYLARRILRGLRGLARLKALMKGQSVQRQAATTLQCMQTLSRLQSQVSARKVRMSEENQSFQRQLQQKREKELDKLQAAPIEEWDYSKKSKEQIQAKLLHRQIAAMRREKALAYASTHQQTWRNTSKESADATIMDPTNPHWGWNWLDRWMDSRPWEGQNTKDENNHKSAKGAASHTMSVGEISKLYALRDQNQNQDNKTSPTSQKPIPQNLASRNIPSTPIKGRAKTSSTGSWGGDGDSKSMFNKTSESKRRHSISVSPEKEDESLVNTPGKFTMAKNKVQSTSAKKQLSSLASGSGTRRHSVPSKIGMNSNKNGVATIPEGKVKVRNGGNR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g04708 462 MobiDBLite consensus disorder prediction 54 77 - -
Vivi1g04708 462 MobiDBLite consensus disorder prediction 284 299 - -
Vivi1g04708 462 Pfam IQ calmodulin-binding motif 120 137 IPR000048 GO:0005515
Vivi1g04708 462 SMART iq_5 116 138 IPR000048 GO:0005515
Vivi1g04708 462 Coils Coil 180 200 - -
Vivi1g04708 462 MobiDBLite consensus disorder prediction 401 447 - -
Vivi1g04708 462 PANTHER IQ-DOMAIN 5-RELATED 1 440 - -
Vivi1g04708 462 MobiDBLite consensus disorder prediction 323 462 - -
Vivi1g04708 462 MobiDBLite consensus disorder prediction 373 390 - -
Vivi1g04708 462 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Vivi1g04708 462 MobiDBLite consensus disorder prediction 323 372 - -
Vivi1g04708 462 MobiDBLite consensus disorder prediction 284 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g04708 Vivi-Chr1 100903381 100905512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g04708 1 428 IQD Protein Family AT5G03040 41.324 1.10e-88 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g04708 - - gmx:100807725 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g04708 1 100903381 100905512 Vivi1g04708 1 100903381 100905512 ECH